Thiothrix lacustris: RCF98_01905
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Entry
RCF98_01905 CDS
T09396
Name
(GenBank) PilC/PilY family type IV pilus protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tlc02044
]
RCF98_01905
02035 Bacterial motility proteins [BR:
tlc02035
]
RCF98_01905
Secretion system [BR:
tlc02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
RCF98_01905
Bacterial motility proteins [BR:
tlc02035
]
Pilus system
Pilus assembly proteins
RCF98_01905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
PQQ_2
VWA_2
VWA
Beta-prop_FAM234A_B
Motif
Other DBs
NCBI-ProteinID:
WML91119
LinkDB
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Position
complement(422866..426723)
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AA seq
1285 aa
AA seq
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MKNKHHLMGWLLLAVALSPVSVVMADETEIYFADKSGDVSPNVLFLIDASGSMSQIVTGS
DSRMDVLKSSFKNVMDNAPANLNVGLMHYANHGLGADYWWSSVKGVNFPVSPIDSAISSP
ITDGGAGMTDAYENLYKLPDPQPALTTPVRTFLSDVVNSWDADGYTPIVDSMYEAARYYR
GDQLGWGLGLPTLGWAAHPLTYENSISCTAYQTASGGTSATPPVSPNNPTCVKEWGQCNG
EILPATCQAQNYSACCDDPADPNDGWVSTGGDGSGYCVNEDYSCSSAITTCENRVCTAYN
TSVDLSYRSPIKHSCQANYLVLMSDGKPEYPYYSGVIPPEVDGTLYYPPSSKRYPGGTGY
AADKSSEIKVSQRLEDYMGVTNCADGSAIKDIAGGNIGYNSGVCGPELSEWLATTDQDGD
SSNGDQVVKTYTVGFALNADPSDKGEEYLQLLASKGKGEYFPAGNEEELSSAFKAILSSI
SKAASSFSSPTYTVDTNSMLAHSDEVYIPVFDQNNKPVWSGNLKKFARTTDGKLVGEPIV
RDPLTGTIISGTPIVNAEGEFLDSADDLWGPVSGTDVAAGGASSQLPVPDARKLYTDVSS
NLSLTASTNALDATNIKVTDGLLVGLPDTGQVVKHFLPDADGDGTSCVGYYYDCAGTKHN
VLGNYSTKVGCVTIANVAVTCSSTDYLTDSAREQLLDFVRGDADPDPAVTTPRQHMGDML
NSKPLVVDYGDGEQRIFAATNEGFLHSIDTDSGVEQWAFMPKDLLPNIKKFMENLPSKDH
VYGIDGPLTLWDYDTNNDGEINSTDGDKRVLFFGLRRGGNAYYALDVTLPDAPKILWKKE
NAPGADDPAWYELGETWSKPSLAKMRIGSATSSQVRNVVVFGAGYDAEKDVENTPATQDQ
PAVVRTADQLGSDVMIVDALTGELLWSLQKSLYNNSSLLNPIKDSIPGDIRVMDMDRNGV
LDRLYFSDTGGNVWRVDMDHDLRDGDPDMYNYSDAILTKIAALGTDGDYGTDTRKFFYEP
DVALIQHNGKTRMTIALGSGYRTHPLNTHTNDRFYVLMDPNVYNEPATTGEKAFTTITNA
DLTNARGTLGEAGSFDDAEDSLLRENDSDNHMGWYYDFDNKGEKVLASAVSFLNKVVFTT
FAPVDESGNEPSDDPCVVPPNSARAYVLDLFTGTAVADLDRTSSTAAGNNNVGGKDDFVV
AGVNEILDAAKVIFRLPSAADGGDCEEGDCQQTVEIRVGKMEMPVMDDANSANDVTSNGV
KDIAAKTDLTDIMPRMFWLDHNATE
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataagcatcacctgatgggttggttactgttggcagtggcgttgtcgcccgtt
tcggtcgtaatggcggatgaaaccgaaatctactttgccgataaaagtggtgatgtgtcg
ccgaatgtcctgttcctgattgatgcttccggcagtatgagtcagattgttacaggcagc
gattcccgtatggatgtactcaaaagctctttcaagaatgtaatggataatgcacctgcc
aatctgaatgtggggttgatgcattacgccaaccacgggttgggggcagattattggtgg
agttccgttaagggtgtgaatttcccggtttcaccgatagatagtgccatcagttcccct
ataacagatggtggcgctgggatgacagatgcttatgaaaatctgtacaaactaccagat
cctcagccagctttgacgacacctgtccgcacattcctgtctgatgttgttaatagttgg
gatgctgatgggtatacgcccattgttgattccatgtatgaagctgcccgttattatcgc
ggtgaccaattaggttggggcctggggttgccgacgctgggatgggcggctcatccgcta
acctatgagaatagcatcagttgcacggcttatcagacagctagtgggggaacctccgcc
acaccacctgtgtcgcctaacaatccaacctgtgtcaaggaatgggggcagtgtaatggt
gaaatattacctgctacttgccaagcacaaaactatagcgcttgttgcgacgatccggct
gatcccaacgatggttgggtgtcaaccggcggagatggctcaggttactgtgttaatgag
gactatagttgctcaagtgcgattactacgtgcgaaaatcgggtgtgcacagcttataac
accagtgtggatttgtcttacaggtctccgattaagcattcctgccaggctaattatttg
gtgctgatgtcggatggcaagccagaatacccttattactccggtgtgattccgccagag
gttgatggcacgctgtattacccgccatcatccaaacggtatccgggtgggacaggttat
gcggctgataagagtagtgaaatcaaggtaagtcaacgtctggaggactacatgggcgtg
acgaactgcgcagatggctccgctataaaagacattgctggtggcaatattggttataac
agcggtgtgtgtgggccggagttgtcggagtggttggcgacgaccgaccaggatggcgat
tcaagtaatggtgatcaggttgtcaaaacctatacggtcggctttgcgctgaatgcagac
ccttctgataagggtgaggagtatttgcagttattagcgagtaaaggcaagggtgagtat
ttccccgctggcaacgaggaagagctgtctagtgcgttcaaggccattctgagttccatc
agcaaggcggcatcttctttcagttcaccgacgtatacggtagataccaacagtatgctg
gcacacagtgatgaggtttacattcccgtgtttgaccagaataacaaacccgtttggtca
ggcaatctgaaaaaatttgcacgtactaccgatggtaagttggtcggtgagccgatcgtg
cgtgatccactgaccggtaccattatttcagggacgccgattgtgaatgccgaaggtgaa
tttctggattccgctgatgatttatgggggcctgtcagcggtacagatgttgctgctggc
ggagcatccagccagttgcctgtccctgatgctcgcaaactgtataccgatgttagtagt
aatttgtcactgacagctagcactaacgcgctggatgcaactaacataaaagtcactgat
ggtttgctggtggggcttcctgatacgggtcaggtagtgaagcattttctgcctgatgcg
gatggtgatgggactagttgtgttgggtactactatgattgtgcgggtactaaacacaat
gttctagggaattattctacgaaagtgggctgtgtgacgattgcaaatgtcgctgtcacc
tgttcttctacagattatttaacagacagtgcacgcgagcagttgttggactttgtgcgg
ggggatgccgatcctgatcctgcggtgacgacgccgcgccagcacatgggcgatatgctc
aatagcaaaccactggtcgttgattatggtgacggtgagcagcggatttttgcagccacc
aacgaaggttttctgcactcgattgataccgattcaggtgtcgaacaatgggcgttcatg
ccgaaagacctgctgcctaatatcaagaaattcatggagaacctgccatccaaagatcat
gtttatggtattgatggcccgttgacactatgggattacgatacgaacaatgatggtgaa
atcaatagtactgatggtgataagcgagtgctgtttttcggtctgcggcgtggtggcaat
gcttattatgcattggacgttaccttgccagatgccccgaagattttgtggaaaaaagaa
aatgccccgggtgctgatgacccagcatggtatgaattaggcgaaacgtggtcaaaaccc
agtctggctaaaatgcggatcggtagtgcgacatcgagccaagtgcgtaatgtggtggtg
tttggtgcaggttacgatgctgagaaagatgtggaaaacacgcctgcgacacaagatcag
ccagcggttgtgcgcacagcagatcaactgggtagtgatgttatgattgttgatgcacta
acgggtgaattactctggtcattacagaaaagcctctacaataacagttcactgctgaac
ccgatcaaagacagtattccgggtgacattcgcgtgatggatatggaccgtaatggtgta
ctcgatcgcctgtatttttctgatactggtgggaatgtgtggcgggtggatatggatcat
gacctgagggatggtgatccagatatgtataactacagtgatgcaattcttaccaaaatt
gcggcgctcggtacagatggggattatggcactgacactcgcaagttcttctatgagccg
gatgtggcactgattcaacataatggtaaaacacgtatgacgattgcattgggtagtggc
taccgcactcacccactgaatactcataccaatgaccgtttctatgtgttgatggatccc
aatgtatataacgaacccgctacaacaggggaaaaggctttcaccaccattaccaatgca
gatttgactaatgcccggggtacgttaggtgaagcaggtagctttgatgatgcagaggat
agcttgctcagagagaatgatagtgacaaccatatgggttggtactatgactttgataat
aaaggtgaaaaagtacttgcttcggctgtcagcttcctgaataaagtggtgtttactacg
tttgctccggttgatgaatcgggtaatgagccatcagatgacccatgtgtagtgccaccc
aatagcgctcgtgcttacgtgcttgacttatttactggcacagccgttgctgaccttgat
cgcacgagcagcacagcggccggtaataataatgtaggtggtaaggatgattttgtcgtg
gcgggtgtcaatgaaatcttagatgctgctaaagttatcttccgcctgccatccgcagca
gatggcggggattgtgaggagggagattgccagcaaaccgttgaaatccgcgtgggtaaa
atggaaatgccggtcatggatgatgccaatagtgccaatgatgtcaccagcaatggtgtg
aaggatattgccgctaagaccgacctgacagacatcatgccacgtatgttctggctcgat
cacaatgctactgaataa
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