KEGG   Thiothrix lacustris: RCF98_02100
Entry
RCF98_02100       CDS       T09396                                 
Symbol
casA
Name
(GenBank) type I-E CRISPR-associated protein Cse1/CasA
  KO
K19123  CRISPR system Cascade subunit CasA
Organism
tlc  Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:tlc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tlc02048]
    RCF98_02100 (casA)
Prokaryotic defense system [BR:tlc02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    RCF98_02100 (casA)
SSDB
Motif
Pfam: CRISPR_Cse1
Other DBs
NCBI-ProteinID: WML91157
LinkDB
Position
complement(464502..466103)
AA seq 533 aa
MNLINDPWIPIRRKSGAKALIAPWQLTEADDPVIALNAPRPDFNGALMQFLIGLLQTAAT
PASHDQWLDWLEEPPTPEILKAHFESYADAFALQGDKGSFMQDFEPLEGAGFNGIAELLI
DSPGGNTVKENKDHFIKRGRVEQVCPCCAATALFSLQTNAPSGGQGHRTSLRGGGPLTTL
VVLDENSDLPNDLWRSVWLNVLEQQALNALTGDKDKTELADIFPWMAKTRTSEKDSGKET
TPLDVNPLQMYWGMPRRIRVQWQSELSGHCDLCNAASDALVTQYQSKNYGVNYVGAWQHP
LSPYSLNKTGDLLPQHPQPGGMTYQHWLGLFEDSESQFSAVVVKRYRLLANEWDEQLRLY
TFGYDMDNMKARCWYETTFPLYTIPETIRPDFTKRVQVLTEASAEFASFVRSCVKDAWFK
RPGDAKGDVSFLTQSFYQHTEIAFYQAAKALQTKLVDGTDQTVLHSWHDTLRKAALDLFD
YWAARGDIAQANPRRVADARNKLLALCYSKKIKEALQLPIKEKKAGKPKKEAA
NT seq 1602 nt   +upstreamnt  +downstreamnt
atgaatctgattaatgacccgtggatacccatacggcgtaagagtggggcgaaagcactc
attgcgccgtggcaactgacagaagctgatgatccagtgattgccttgaatgcaccaaga
cccgatttcaatggggcattgatgcagttcttgattggtttgttgcaaacagccgccacg
cctgcaagccatgatcaatggctggactggttggaggagccaccgacaccggaaatcttg
aaagcgcattttgagtcgtatgctgatgcgtttgcgctgcaaggtgataaaggttccttc
atgcaggatttcgagccgttggaaggtgcgggctttaacggtattgcagaactactgatt
gattcccccggtggtaacacggtcaaagaaaacaaagaccatttcatcaaacgggggcgt
gttgagcaggtttgtccgtgttgtgccgcgactgccttgttctctctgcaaacgaatgca
cccagcggtgggcagggacatcggacttccttgcgtggcggtggaccattaacaaccttg
gttgtgttggatgaaaacagcgacctgcccaatgatctctggcgtagtgtgtggctgaat
gtgctggagcagcaagcgctgaatgccttgacaggcgacaaggataaaaccgaactggcc
gatattttcccttggatggcaaaaaccagaaccagtgaaaaagattccggtaaagaaacc
acgccactggatgtgaaccctttgcagatgtactggggaatgccgcgtcggattcgggtg
caatggcaatcggaattatccgggcattgtgatctttgtaatgctgcctcagatgcattg
gtgacgcagtatcagagcaaaaactacggggtgaattacgttggggcttggcagcatccc
ttaagcccttactcactgaataagaccggggatttgttaccacagcatccacaaccgggc
gggatgacttaccagcattggttgggtttgtttgaagacagcgaaagccaattcagtgcg
gtggtcgttaagcgttaccgcctcttagccaatgaatgggatgagcaactacgtttgtac
acctttggttatgacatggacaatatgaaggctcgctgctggtatgaaacgacttttccc
ctgtatacgattcctgaaaccattcgccccgacttcaccaagcgggtacaggtattgaca
gaagcatctgccgaatttgccagctttgtgcgttcttgtgtgaaagatgcatggttcaaa
cgtccgggcgatgccaagggtgatgtgtcgtttctgacgcaaagtttctaccaacacacc
gaaatcgcgttctatcaagcggcgaaagccctgcaaaccaagttggtcgatggcacagat
caaaccgttttgcattcatggcatgacactttgcgcaaagcagcactggatttatttgat
tactgggcagcacggggtgacatcgcgcaagcaaacccgcgtcgggtagcggatgcccgc
aataagctgctggcgttgtgctacagcaaaaaaatcaaggaagccttgcagctcccgatc
aaagagaagaaagccggtaaacccaagaaggaggccgcatga

DBGET integrated database retrieval system