KEGG   Thiothrix lacustris: RCF98_02105
Entry
RCF98_02105       CDS       T09396                                 
Symbol
cas3
Name
(GenBank) CRISPR-associated helicase Cas3'
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
tlc  Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:tlc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tlc02048]
    RCF98_02105 (cas3)
Enzymes [BR:tlc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RCF98_02105 (cas3)
Prokaryotic defense system [BR:tlc02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    RCF98_02105 (cas3)
SSDB
Motif
Pfam: Cas3_HD Cas3-like_C_2 DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: WML91158
LinkDB
Position
complement(466090..468876)
AA seq 928 aa
MGLYFKYWGKAKPGLDEAWVQYHLLPYHSLDVAAVGYVLLNQDHAYLNHFLRLTGLSKSQ
FIAWFTFLLALHDIGKFADSFQSLNADVLKKLQQRTSQRQYGLRHDSLGWILWKNHLRQQ
FQDKGIMPKSTGSKRRESAPHVLDFWMGAMVGHHGQPPQPTTNRLPRDDFDEAHDFAAAT
AFLDDLIPLLFDETPVFPACSSEAIQLASWWLSGLAVLSDWLGSNTRFFPYQSQAMPLAE
YWEQAKQRAGQAIQEAELLSCQPSLSLSLADLIDVESHTTLDPTPLQNMVSGWELPDSPH
LFILEDVTGAGKTEAAVLLAHRLMQAGQGNSLYFALPTMATANTMYARMKDVYRRLFVSS
ANPSLILAHGASDMSMDFRQSVFPEMPPTADNYGDGTTPAGAHCNAWLADNRKKALLADI
GIGTVDQALLAILPARHQSLRLLGLVNKILLVDEVHACDAYMHELLCALLRAHAAAGGSV
ILLSATLPKKQRQALLNAYAEGQGWRKPVLQATDDKSYPLVSCLNAQGLREQVVATRESV
KREVSIQFLSEWQAIDDLLSRTVEQGKCACWIRNTVKDAIEAYQQIKAQHPDWQVDLFHA
RYALGDRIDIERRVVARFDKSSTAESRRGQILIATQVVEQSLDLDFDTLITDLAPIDLLI
QRAGRLRRHTRDVLGNRIQGEDQRGAVTLHVHSPDVIDSPTGRWMADFFPNAQKVYDHHG
QLWLTAKLLHQQGQFKMPEDARRLIEGVYGVDAQDNIPQSLLYRSNEAEGGDRADASIAR
LNALSMAVGYTDASTNRWWDEAKTPTRLGEETTMVYLAKWQDGVLLPWADDPKHAWQLSA
VSMRTYWIAAEAATSDLTQEAIEPFKVGNLPAKGKWGVLLPLQSVAGDRWQGVALNAKQE
SVRFIYSEKFGLMVDAEPVKKDAKHESD
NT seq 2787 nt   +upstreamnt  +downstreamnt
atggggctgtatttcaagtattggggcaaagcgaaaccggggctggatgaggcatgggtg
cagtatcacttgttgccgtatcattcgttggatgtggcggcggtgggctatgtactgctt
aaccaagatcatgcctatctcaatcacttcttacgcttgactggtttgagcaagtcgcaa
ttcattgcatggttcacgtttctgctggctttgcatgacattggaaagtttgcggacagt
ttccaaagcctgaatgcggatgtgctgaaaaaactgcaacaacgcactagtcagcggcaa
tacgggctacgccatgattcgttagggtggattttgtggaaaaatcacttgcgccaacaa
ttccaagacaaaggcatcatgccgaaaagcactggctcgaaacggcgtgaatctgcccca
catgtattggatttctggatgggtgcaatggtcgggcatcatgggcaaccgccacagccg
accacaaatcgcttgccacgcgatgatttcgacgaagcccatgattttgcagcagctact
gcatttctggatgacttgattccattgctgttcgatgaaacgccggtttttcctgcctgt
agctcagaggctatccaactagcttcatggtggctttctggcttggcagttttgagcgac
tggctcggctctaatacccgcttcttcccttatcaaagtcaagccatgccattggcagag
tattgggaacaagcgaagcagcgagcagggcaagccatacaagaagctgaattactgtct
tgtcagccatcactatcactcagcttggctgacttgattgatgttgaatcacacacaacc
ctagacccaacgcccttacagaacatggtttcaggttgggagttgcccgatagtccgcac
ctgttcattctggaagatgtgacgggcgcaggaaaaaccgaagcggcggttctgttggcg
catcgcctgatgcaagcggggcagggcaatagcttgtacttcgctttgcctacgatggcg
acagccaacaccatgtatgcacgcatgaaggatgtctatcgcaggttgtttgtcagtagc
gctaacccatccttgatcttggcacatggcgccagtgatatgtcgatggattttcggcaa
tcggtgtttcctgaaatgccaccgacagccgataactatggcgatggaacaaccccggcg
ggagcacattgcaacgcatggctggcagacaatcgtaaaaaagcactgctggcagatatt
ggcattggcacggttgaccaagcgttattggctatattgcctgcgcgtcaccaatcgctg
cggttattggggctggtgaacaagattttgttggtggatgaagttcatgcttgtgatgcc
tacatgcatgaattgttgtgtgctttgctgcgtgcccatgcagcagcgggcggtagcgtg
attttgttgtctgccactttgccgaagaaacaacgtcaagccttattgaatgcgtatgcc
gagggacaaggttggcgtaaacctgttttgcaggctaccgatgacaaatcttatcccttg
gtgagttgtttgaacgcgcaaggcttgcgtgagcaagtggtggccactcgtgaaagtgtt
aagcgtgaggtgagtatccaattcctgtcagaatggcaagccattgatgatttactgagc
cgtaccgttgaacaggggaaatgtgcctgctggattcgcaacacggtcaaggatgctatc
gaggcttaccagcaaatcaaagcgcaacatcctgattggcaggtggatttgttccatgct
cgctatgccttgggggatcgcatcgacattgaaaggcgcgtggtggcacgctttgacaaa
agtagcactgccgagtcacgacgtgggcaaatcctgattgctacccaagtggtcgagcaa
tcgctggatttggattttgatacgctgattaccgaccttgcaccgattgatttgttgatt
cagcgggcggggcgtttgcggcggcatacccgcgatgtgctgggcaatcggattcagggt
gaggatcagcggggtgcggtcactttgcatgttcattcaccagatgtcatcgactctcca
acagggcgatggatggctgatttcttcccgaatgcgcagaaagtgtatgaccatcatgga
caattgtggctgaccgccaagctgttacaccaacagggtcagtttaagatgccggaggat
gcccgacgtttgattgaaggcgtgtatggcgtggatgcgcaggataacattccgcaaagc
ctgttgtatcgcagtaatgaagccgaaggcggggatcgtgccgatgcgagtattgcccgc
ttgaatgcgttgtcaatggcggtgggttacaccgatgcttcgaccaatcgctggtgggat
gaagccaaaaccccaacgcgcttgggtgaggaaacgacaatggtgtatctcgccaagtgg
caggatggcgtattgctgccttgggcagatgacccaaaacatgcgtggcaattgagtgcg
gtatccatgcgtacttactggattgcagcagaagcagccacgtctgatttgacgcaagag
gcgattgagccattcaaagtaggtaatttgccagccaaagggaagtggggcgtgttgctg
ccgcttcaatcggttgcaggtgataggtggcaaggtgttgctctaaatgccaagcaagaa
tctgtgcgttttatttacagcgaaaagtttgggttgatggtggatgccgaacccgtaaaa
aaggatgcaaaacatgaatctgattaa

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