KEGG   Thiothrix lacustris: RCF98_02985
Entry
RCF98_02985       CDS       T09396                                 
Name
(GenBank) type II toxin-antitoxin system VapC family toxin
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
tlc  Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:tlc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tlc03016]
    RCF98_02985
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tlc02048]
    RCF98_02985
Transfer RNA biogenesis [BR:tlc03016]
 Prokaryotic type
  tRNA degradation factors
   RCF98_02985
Prokaryotic defense system [BR:tlc02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    RCF98_02985
SSDB
Motif
Pfam: PIN PIN_3 DUF5615
Other DBs
NCBI-ProteinID: WML91326
LinkDB
Position
complement(642999..643397)
AA seq 132 aa
MKYLLDTNICIYLIKEKPPEVLVRFTALKPAQVFISAVTVFELYYGVENSQAHKRNLAAL
EKFLRPMTILDFTPEDAKQAARIRADLKRKGTPIGAYDLQIAATALANGLTVVTNNTDEF
QRVVGLRLENWV
NT seq 399 nt   +upstreamnt  +downstreamnt
atgaagtacctgctggataccaacatctgtatttacctcatcaaggaaaaaccgccagaa
gtgttggtgcgctttacggcattgaaaccagcgcaagtattcatttcagccgtgacggtg
tttgaactgtattatggcgttgaaaatagtcaggctcacaaacgcaacttggcggcgttg
gaaaaattcctgcgcccgatgactatcctcgactttacccctgaagatgccaaacaagct
gcacggattcgtgccgacctcaagcgcaaaggtacacccattggggcttatgatctgcaa
attgccgcgacagcgttagccaatggcttgacggtagtgaccaataacactgatgagttt
cagcgggttgttgggttaaggttggagaattgggtttag

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