Thiothrix lacustris: RCF98_02995
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Entry
RCF98_02995 CDS
T09396
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tlc
Thiothrix lacustris
Pathway
tlc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RCF98_02995 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tlc03019
]
RCF98_02995 (groL)
03110 Chaperones and folding catalysts [BR:
tlc03110
]
RCF98_02995 (groL)
03029 Mitochondrial biogenesis [BR:
tlc03029
]
RCF98_02995 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tlc04147
]
RCF98_02995 (groL)
Enzymes [BR:
tlc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RCF98_02995 (groL)
Messenger RNA biogenesis [BR:
tlc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RCF98_02995 (groL)
Chaperones and folding catalysts [BR:
tlc03110
]
Heat shock proteins
HSP60 / Chaperonin
RCF98_02995 (groL)
Mitochondrial biogenesis [BR:
tlc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RCF98_02995 (groL)
Exosome [BR:
tlc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RCF98_02995 (groL)
Exosomal proteins of other body fluids (saliva and urine)
RCF98_02995 (groL)
Exosomal proteins of breast cancer cells
RCF98_02995 (groL)
Exosomal proteins of colorectal cancer cells
RCF98_02995 (groL)
Exosomal proteins of bladder cancer cells
RCF98_02995 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WML91328
UniProt:
A0ABY9MRP2
LinkDB
All DBs
Position
complement(643752..645392)
Genome browser
AA seq
546 aa
AA seq
DB search
MSAKEVRFGDDARVRMVRGINVLANAVKVTLGPKGRNVVLEKSFGAPTVTKDGVSVAKEI
ELEDKFENMGAQLVKEVSSKTSDAAGDGTTTATVLAQAIVREGMKSVTAGMNPMDLKRGI
DKAVIAAVAELKKMSTPCADTNAIAQVGSISANSDDAIGNIIATAMDKVGKEGVITVEEG
SGLDNELDVVEGMQFDRGYLSPYFVNNQQSMSAELEGPYVLLYDKKISNIRELLPALEGA
AKAGKPLMIIAEDIEGEALATLVVNNIRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEVGLALDKVTLDDLGQAKRINITKDNTTIIDGAGSPDDIKARVDQVRSQIETTSSDY
DREKLQERVAKLAGGVAVIKVGAATEIEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RALQAIANLKGDNHEQDVGIQIAMRAMEEPLRQICANAGDEPSVILNAVKAGEGNFGYNA
RTSEYGDMIAMGILDPTKVTRTALQNAASVSGLIITTEAMVAELPKKDGGAGMPDMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctaaagaagtacgttttggtgatgacgctcgcgttcgcatggttcgcggtatc
aatgttctggctaacgccgtaaaagttacactgggtcctaaaggccgtaacgtcgttttg
gaaaaatcgttcggcgcaccgactgtgaccaaagatggcgtttccgttgccaaagaaatc
gaactggaagacaagttcgagaacatgggcgcacagttggttaaggaagtatcttctaag
acttctgacgcggcaggtgatggtactacgactgcaaccgtactggcgcaagccatcgtg
cgtgaaggcatgaagtctgttactgctggcatgaaccctatggatctgaagcgcggtatc
gacaaagctgtcatcgctgcggttgctgaactgaaaaaaatgtctacgccatgcgcagac
accaatgccattgcacaggttggtagcatttctgctaactctgacgacgccatcggtaac
atcattgcgactgcaatggacaaagttggtaaagaaggcgtcatcaccgttgaagaaggt
tccggcctcgacaacgaacttgacgttgtagaaggtatgcagtttgaccgtggctacctg
tccccatactttgtgaacaatcaacaaagcatgtcggctgaattggaaggcccttacgta
ctgctgtacgacaagaaaatttccaatatccgtgaactgctgccagccctcgaaggcgct
gcgaaagcaggcaagccactgatgatcatcgctgaagacatcgaaggcgaagcactggcg
acgctggtggtgaacaacatccgtggtatcgttaaagtggcagccgttaaagcaccgggc
tttggcgaccgtcgtaaagccatgttgcaagacatcgctatcctgacgggcggcacggtt
atttctgaagaagtcggtttggctttggataaagtcacgctggacgatctgggtcaagcc
aagcgcatcaacatcaccaaagacaacaccaccatcattgatggcgcgggttctcctgat
gacatcaaagcgcgtgttgaccaagtgcgttcacaaatcgaaaccacttcatctgattat
gaccgtgaaaaactgcaagagcgcgttgccaaactggcaggcggcgttgcggtcatcaag
gtcggtgctgctaccgaaatcgagatgaaagaaaagaaagcccgcgttgaagatgccctg
cacgctacccgtgcagcggttgaagaaggtgtggttcctggcggtggtgttgcactggtg
cgtgcgctgcaagcgattgcaaacctgaaaggtgacaaccacgagcaagacgtaggtatc
caaatcgctatgcgtgcgatggaagagccgctgcgccaaatctgcgctaacgctggcgat
gagccatccgttatcctgaacgcggtgaaagcgggcgaaggtaactttggttacaacgca
cgtacttccgagtacggcgatatgatcgcgatgggtatccttgacccaactaaagttacc
cgtactgcgttgcagaacgcggcatctgtttctggcctgatcatcacgaccgaagcaatg
gttgctgaactgccgaagaaagatggcggcgctggtatgccagacatgggcggtatgggt
ggtatgggcggcatgatgtaa
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