Thiothrix lacustris: RCF98_03175
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Entry
RCF98_03175 CDS
T09396
Name
(GenBank) RNA-guided endonuclease TnpB family protein
KO
K07496
putative transposase
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
RCF98_03175
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Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
Zn_ribbon_FGT1_2
Zn_ribbon_IS1595
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
WML91362
UniProt:
A0ABY9MRW8
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Position
complement(674451..675602)
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AA seq
383 aa
AA seq
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MKTKRAYQFRFYPDQQQETLLAQTFGCVRYVYNSILRYRTDAYYQAQEKVGYTKASSQLT
AIKKLPEATFLNDVSSVPLQQCLRNQQTAFKNFFEGRAKYPVFKSKKHRQSAEFTYRAFS
YRDGELKLAKCDKPLNIKWSQALPADPTTVTVSKDQAGRYFVSCLCEFEPTLLPVTDKKA
GIDVGIKDLFVTSDGFKSGNPRHTAQHAAKLAKYQRRLAKKTLGSKNRLKAKRKVARVHA
KISDDRSDNLHKLSRKLINENQVVCAENLAVKNMIKNPTLAKHIADASWGEFTRQLAYKA
GWYGRTYVEIGRFFPSTKRCSCCGFVKENMPLDVRSWECPECGTTHDRDVNAARNILAAG
LAVLAFGENVSGDGISVSSSCSR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactaaacgcgcctaccaattccgattctacccagaccaacaacaagaaacgttg
ctggctcagacgttcggttgtgtgcgctacgtttacaacagcatcttgcgttaccgcacg
gatgcctactatcaggctcaggaaaaagttgggtacacgaaagcgagttcccaactgact
gccatcaaaaaactgcctgaagctactttcctgaacgacgtttccagtgttccgctgcaa
caatgcttgaggaatcagcaaacggcgttcaaaaacttctttgaaggtcgggcaaaatac
cctgtcttcaaatctaaaaagcaccgccaatcggctgaattcacgtaccgcgcgttcagc
taccgtgacggtgaattgaaactggcgaagtgcgataaaccgctgaatatcaagtggagt
caggcacttccggctgaccccaccacggttactgtttccaaagatcaggccggacgctat
tttgtgtcttgcttgtgtgaatttgaacccacgctgttgcccgtcaccgataaaaaggca
ggcattgacgtgggcatcaaggatttgttcgttacctctgacggttttaaatccggtaat
ccccgccacaccgcacaacacgcggctaaactcgcgaagtaccaacgccgtcttgccaag
aagacactcggcagcaagaaccggttgaaagctaaacgcaaggtcgcccgtgttcacgcg
aaaatttccgatgaccgttcggacaacttgcacaagttgtcccgcaaactgattaacgag
aaccaagtggtttgtgctgaaaacctcgccgtgaagaacatgattaagaacccaacgtta
gccaagcacattgcggatgcaagttggggtgagttcactcgccagcttgcgtacaaagct
ggctggtacgggaggacatacgttgagatagggagattcttcccgtccactaaacgctgt
tcctgctgtgggttcgtgaaagaaaacatgccgctggacgtgcgatcgtgggagtgcccc
gaatgcggcacaacccacgaccgtgacgtgaatgcagcacgtaacattttagccgccggg
ctggcggtgttagcctttggagagaatgttagtggcgatggcatttcggtgtcgtcatcc
tgttctcggtga
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