Thiothrix lacustris: RCF98_03425
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Entry
RCF98_03425 CDS
T09396
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
tlc
Thiothrix lacustris
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA
nSTAND3
AAA_2
MCM
FleQ
TusA
Motif
Other DBs
NCBI-ProteinID:
WML91411
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Position
complement(720089..721453)
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AA seq
454 aa
AA seq
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MNARILIIDDEPVAVKNLAYALRKTGYEVITRESGSGGLDALQTQPFDLILTDLRMERVD
GMAILKRALETDPDVPVVLITAHGTLDSAVEAMKAGAFHFIAKPFRLDEVRSIVANALQL
GQLKRENRALREQVRHGLHTHAGLVTQNPAMLRLLETARQVAATDTTILISGESGTGKEL
LARYIHAHSQRSKGVFSGINCGAFQEDLLANELFGHEKGAYTGANDTRPGLIEAANGGSL
FLDEIGEMPLTMQVKLLRVVQEREVQRLGAQTAVAVDVRVITATHRDLRAEVAAGRFRQD
LYFRLDVIGLHLPSLSERREDIPLLAFYFLHKHALRMGREVDSIATDAVSLLMGYSYPGN
VRELENLIERGVALARGSELTVAELPAALAEQVVHALPDAQGDLPTLGQREEEYIRYVLE
HSDGNRTKAANILGIDRVSLWRKLKKYGLAEGEE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgcggatattaatcatcgacgatgaacccgttgcggtcaaaaaccttgcttac
gccttgcgtaaaaccggctacgaggtgattacccgtgaaagtggcagtggcgggctggat
gctttgcaaacccagccgtttgacctgattctcaccgatttgcgcatggaacgggtcgat
ggcatggctatcctcaagcgtgcgttggaaactgaccccgacgtgccggtggtgctgatt
accgcgcacggcacgctggattcggcagtggaggcgatgaaggcaggtgctttccatttc
atcgccaaaccctttcggctggatgaagtgcgcagcatcgtcgccaatgcgctgcaattg
gggcaactcaagcgtgaaaaccgtgccttgcgcgaacaagttcgccacggcttgcatacc
catgccgggctggtgacgcaaaaccccgcaatgttgcgcttgctggaaacggcgcgtcag
gtggcggcgacggataccaccatcctgatcagtggggaaagcggcacgggcaaggaattg
ctggcgcggtatatccacgcgcatagccagcgcagcaaaggcgtatttagcggcatcaac
tgcggtgcgtttcaggaagatttgctggcaaacgagctgttcgggcatgaaaaaggcgcg
tataccggggcgaatgatacccgccccggcctgatcgaagcagccaacggcggcagcttg
tttctggatgaaatcggtgaaatgccgctgaccatgcaggttaagttgctgcgggtggtg
caggaacgggaagtgcagcggctgggggcgcaaacggctgtggcggtggatgtgcgggta
attaccgctacccaccgtgatttacgcgctgaagtagcagcggggcgcttccgtcaggat
ttgtatttcaggctggatgtgattggcttacatttgccatctttgtcggaacggcgtgaa
gacattccgttgctggcgttctatttcttacacaaacatgcgctgcggatggggcgtgag
gtggatagcattgctacggatgcggtttccctgttgatggggtacagctaccccggcaat
gtacgcgaactggaaaacctgattgagcgcggggtggccttggcgcggggcagtgaattg
acagtggcggaactgccagcggctttggcggaacaggttgtccacgccctgccggatgcg
caaggcgacttgccaaccttggggcagcgtgaagaggaatacatccgctacgtgttggaa
cacagcgacggcaaccgcaccaaggcggcgaatattctgggtatcgaccgcgtgtcgctg
tggcgcaagctgaagaagtatggcttggcagagggggaggagtaa
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