Thiothrix lacustris: RCF98_04025
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Entry
RCF98_04025 CDS
T09396
Name
(GenBank) IPTL-CTERM sorting domain-containing protein
Organism
tlc
Thiothrix lacustris
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SdrD_B
SpaA
CarboxypepD_reg
Ig_J
EMC7_beta-sandw
CarbopepD_reg_2
GBD_IRG7_N
IPTL-CTERM
bMG3
Dioxygenase_C
Motif
Other DBs
NCBI-ProteinID:
WML91529
LinkDB
All DBs
Position
complement(839360..844267)
Genome browser
AA seq
1635 aa
AA seq
DB search
MKKMTSAKALLLTFCSVSVLTAANQSWAAITTVTNCAQVSAVAEADSNSTPNNKSEADLL
DAFAADTLEKDEACVSLKALPAPVSVGDYIWEDSNHDGKQTIDEPALAGVTVTLLDKDGK
PAKDINGSAVPSVTTDTAGKYLFSDLAEGQYQVVVTPPEGYVATKPVGDIDNTANDDSNC
AADGKTALFSLTFGAEPTDDGDPDASSNLSVDCGFYKPTHSIGNRVWIDTNNNGLADVGE
EFAMAGIKLELKDATDKLVTSAMTDAKGRYLFSDLAAGSYQVCVIADNFIAGNVLEGYTA
SSGGNVLDANTDIDGDDNGTDDTATGLCSSLVVLDDKEPLLETTATGMDGADGVGTEDAR
SNLTIDFGIVPPVEPAKPVSVGDYLWIDTNQDGLQSEDEVGLKGATVTLLDKDGKPAKDV
DGNAIAPSVTGTDGLYGFTKLPEGDYSINVKAPEGYLPTQNAGSVDDVPANNDSNCAAQP
DGSASTALFNLTADQEPDATVDGDGTNGNMTVDCGFYLPEPGKATISGTVKADTTGDTVG
EDALEGVLIALLNKDGTPVLDKDGKPVTTLTNTSGVYLFTDVAPGDYLVRETSPSGYVSV
SDQDSTSPEDDTVNTNTNDNSIPVSVVANETDDGNDFVARKPVEPAKPVSVGDYLWIDTN
QDGLQSEDEVGLKGATVTLLDKDGKPAKDVDGNAIAPSVTGTDGLYGFTKLPEGDYSINV
KAPEGYLPTQNAGSVDDVPANNDSNCAAQPDGSASTALFNLTAEQEPDATVDDDGTNGNM
TVDCGFYLPEPGKATISGTVKADTTGDTVGEDALEGVLIALLNKDGTPVLDKDGKPVTTL
TNTSGVYLFTDVAPGDYLVRETAPSDYVSVSDQDSTSPEDDTVNTNTNDNSIPVSVVANE
TDDGNDFVARKPVEPAKPVSVGDYLWIDTNQDGLQSEDEVGLKGATVTLLDKDGKPAKDV
DGNAIAPSVTGTDGLYGFTKLPEGDYSINVKAPEGYLPTQNAGSVDDVPANNDSNCAAQP
DGSASTALFNLTADQEPDATVDGDGTNGNMTVDCGFYLPEPGKATISGTVKADTTGDTMG
EDALAGVLIALLNKDGTPVLDKDGKPVTTLTNASGVYLFTDVAPGDYLVRETAPSDYVSV
SDQDSTSPEDDTVNTNTNDNSIPVSVVANETDDGNDFVARKPVSSTPVSVGNQIWIDSNA
NGKRDEGESLLSGAVVALTDATGRAVTDLDGKPVASHTTGSDGLYVFSNLPEGDYIMTVQ
PPEGFFSTLGGIDVDDDPSDTDSNCRVNPLNSTIETHPFTLTAGMEPDTDGDNANGNMTV
DCGFYGSVALGNKIWLDENANGQQDNAELGIAGITVSLTEEDGITPVTDINGNLVAAVTT
DANGNYLFENLQPGNYRVTVKPGTGSAYSLTKGGADPDTDPSNTDSNCKVVAGSYQTPAV
TLLPGSEPGVKVDGDNENSNSTVDCGLIRPVNLGSRLWIDLDGNGKQDGGEPGVSGATVT
LLDKDGKPVTDIFGNVLLPQTTDADGKYFFGNLREGAYVVNVVPPAGYLPTIAATDPNNN
NATDSNGILNPNGSISSQPIDLKWGEEPEDGGATNTTVGFGLIANIHVPTLSQWGMMLMS
MLLATAAFFRRRRED
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatgactagtgcaaaagcactattgctgaccttctgttcggttagcgtactg
actgccgccaatcagtcgtgggcagcgataacgactgtcaccaactgtgcgcaagtatcg
gcagttgctgaggccgattctaattcgacgcctaataataaaagtgaagcagatctattg
gatgcctttgcagctgacaccctagagaaggatgaagcctgtgtatcgttgaaggcatta
ccagcgcccgtttctgtgggcgactatatctgggaagacagcaatcatgatggcaaacaa
accattgatgaacctgctcttgccggtgtaacagtcaccttgttagacaaggatggtaaa
cccgcgaaggatattaatggctcagccgttcctagcgtgaccaccgacactgcgggtaaa
tacttgttcagtgacctagcagaaggccagtaccaagtagtggtcactccgccagagggc
tatgtcgctactaaacctgttggtgatattgataatactgccaacgatgacagtaattgc
gctgcggatggcaagactgcattgttcagcctgacatttggcgctgaacccacagacgac
ggtgatcccgatgccagcagcaatctgagcgtagattgtggtttctacaaacctacccat
agcatcggcaaccgtgtctggatcgataccaacaacaatggcttggcagatgtaggcgaa
gagtttgctatggcgggcatcaaactcgaactgaaagacgcaaccgataagctagtaacc
tctgccatgaccgatgccaagggtcgttacctgttcagtgatttggcggcaggtagctac
caagtttgtgttatcgcggataacttcattgccggtaatgtgttggaaggctacacggcc
agttcggggggtaacgtactggatgctaacaccgacattgacggtgatgataacggtacg
gatgacaccgctaccggtttatgttccagcctcgtcgtattagacgacaaagaaccgctg
ctcgaaaccacagccactggcatggatggcgctgatggtgttggcaccgaagatgctcgt
tccaatctaaccatcgatttcgggattgtaccgcctgttgaacctgcgaaacccgtttcc
gtgggggattacctttggatcgacaccaaccaagacggcctccagagtgaagatgaagtg
ggtctaaaaggcgccacagtgactctgctagacaaagatggcaagcccgcgaaagacgtt
gatggcaatgcgattgcgccaagcgttaccggtactgatggtctatatggcttcaccaaa
ctgccagaaggtgactacagcatcaatgtcaaagccccagaaggctacctgccgacacaa
aacgcaggcagtgtcgacgatgtgcctgccaacaacgacagcaactgtgctgctcaacca
gatggcagcgccagcaccgcactgttcaacctgacggccgatcaagaacccgatgcaacc
gtagacggtgatggcaccaacggcaatatgaccgtggactgcggtttctatctacccgaa
ccgggcaaggcaacgatcagtggtacggtcaaagcggacaccacgggcgacacagtgggt
gaagatgcgcttgaaggtgtgctgattgccttgctgaacaaagacggtacacccgtgctg
gataaggatggcaagcccgttactaccctgacgaataccagtggtgtttaccttttcact
gacgtagcccccggtgactatttggtgcgggaaacttccccatccggttatgtttcggtg
agcgatcaggacagcacttcaccagaagacgataccgtgaacaccaataccaatgacaac
agcattcctgttagcgtggtagcgaatgaaaccgatgacggcaatgacttcgtggcgcgt
aagcctgttgaacctgcgaaacccgtttccgtgggggattacctttggatcgacaccaac
caagacggcctccagagtgaagatgaagtgggtctaaaaggcgccaccgtgactctgcta
gacaaagatggcaagcccgcgaaagacgttgatggcaatgcgattgcgccaagcgttacc
ggtactgatggtctatatggcttcaccaaactgccagaaggtgactacagcatcaatgtc
aaagccccagaaggctacctgccgacacaaaacgcaggcagtgtcgacgatgtgcctgcc
aacaacgacagcaactgtgctgctcaaccagatggcagcgccagcaccgcactgttcaat
ctgacggccgagcaagaacccgatgcaaccgtagacgatgatggcaccaacggcaatatg
accgtggactgcggtttctatctacccgaaccgggcaaggcaacgatcagtggtacagtt
aaagcggacaccacgggcgacacagtgggtgaagatgcgcttgaaggtgtgctgattgcc
ttgctgaacaaggatggtacgcctgtactggataaggatggcaagcccgttactaccctg
acgaataccagtggtgtttaccttttcactgacgtagcccccggtgactatttggtgcgg
gaaactgccccatccgattatgtttcggtgagcgatcaggacagcacttcaccagaagac
gataccgtgaacaccaataccaatgacaacagcattcctgttagcgtggtagcgaatgaa
accgatgacggcaatgacttcgtggcgcgtaagcctgttgaacctgcgaaacccgtttcc
gtgggggattacctttggatcgacaccaaccaagacggcctccagagtgaagatgaagtg
ggtctaaaaggcgccaccgtgactctgctagacaaagatggcaagcccgcgaaagacgtt
gatggcaatgcgattgcgccaagcgttaccggtactgatggcctatatggcttcaccaaa
ctgccagaaggtgactacagcatcaatgtcaaagccccagaaggctacctgccgacacaa
aacgcaggcagtgtcgacgatgtgcctgccaacaacgacagcaactgtgctgctcaacca
gatggcagcgccagcaccgcactgttcaacctgacggccgatcaagaacccgatgcaacc
gtagacggtgatggcaccaacggcaatatgaccgtggactgcggtttctatctacccgaa
ccgggcaaggcaacgatcagtggtacggtcaaagcggacaccacgggcgatacgatgggt
gaagatgcgctggcaggtgtgttgattgccttgctgaacaaggatggtacgcctgtactg
gataaggatggcaagcccgttactaccctgacgaatgccagtggtgtttaccttttcact
gacgtagcccccggtgactatttggtgcgggaaactgccccatccgattatgtttcggtg
agcgatcaggacagcacttcaccagaagacgataccgtgaacaccaataccaatgacaac
agcattcctgttagcgtggtagcgaatgaaaccgatgacggcaatgacttcgtggcgcgt
aagcctgttagtagcacaccggtttctgttggtaatcagatctggatcgatagcaacgcg
aatggcaaacgtgatgaaggtgaaagcttgttatcaggcgcagtggttgccttgacggat
gcaacaggtcgtgcagtgacagatctagatggtaagccagttgcttcacataccaccggt
agtgatggcctctatgtattcagtaatctgccggaaggtgattacatcatgacggttcaa
ccaccagaaggattcttctccacgctggggggtattgatgtggatgatgatcctagtgat
acagacagtaactgtcgtgttaacccgctcaacagtacgattgaaacccacccattcaca
ctgacagcaggtatggagccggatacagatggtgataatgctaatggcaatatgaccgtg
gactgcggcttctacggatcggtggccttgggtaacaagatctggttggatgagaatgct
aatggtcagcaagacaatgctgagctgggtattgctggtattactgtcagtctgacggaa
gaagacggcataacacctgtgaccgatatcaacggtaatttagtggctgcggtgaccact
gatgctaatggaaattatctgttcgagaatctgcaaccgggcaattacagggtcaccgtc
aagccgggcacaggttctgcttacagcctgaccaaaggtggcgctgatcctgataccgat
ccatccaatactgatagtaactgtaaggtagtggctggtagttaccaaacgccagcggtc
acgctgttgccgggtagcgaaccaggtgtgaaagtggatggtgataacgaaaatagcaat
agcaccgttgactgcggtctaatccgccctgttaatttgggtagccgcctgtggattgac
ttagacggtaacggtaagcaagacggtggtgagcctggtgtatcgggtgcaacggttacg
ttgttggataaggatggcaagccggtgactgacatcttcggtaacgtgttgctgccacaa
accaccgatgcggatggcaagtacttcttcggtaatctgcgtgaaggggcatatgtggta
aatgttgtgccacctgctggctatttaccgactatcgcagcgactgatccgaacaataat
aatgcaacggatagcaatggtattctcaatccaaatgggagcatttccagtcagccgatt
gacctcaagtggggtgaggagccagaagatggtggtgcaaccaatactacggtcggcttt
gggctgattgccaatatacacgttccaactctcagtcagtggggcatgatgctcatgagc
atgttgctggccacagccgcattcttccgtcgccgtcgcgaagattga
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