Thiothrix lacustris: RCF98_04055
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Entry
RCF98_04055 CDS
T09396
Name
(GenBank) RNA-guided endonuclease TnpB family protein
KO
K07496
putative transposase
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
RCF98_04055
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Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
AFG1_ATPase
Zn_ribbon_FGT1_2
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
WML91535
UniProt:
A0ABY9MVR4
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Position
854886..856037
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AA seq
383 aa
AA seq
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MPTKRAYKFRFYPDLQQEKLLAQTFGCVRYVYNSILRYRTDAYDQAQEKVSYLGANARLT
AIKKLPERLFLNDVSSVPLQQCLRNQQTAFKNFFEGRAKYPVFKSKKHRQSAEFTYRAFT
FRNGELKLAKCAVPLDIRWSQPLPAAPTTVTVSKDQAGRYFVSCLCEFDPMLLPVTDKKV
GIDVGIKDLFVTSDGFKSGNPRHTAQHAVKLAKYQRRLAKKKRGSKNRLKAKRKVARVHA
KISDCRSDNLHKLSRRLINENQVICVENLAVKNMIKNPTLAKHIADASWGEFTRQLAYKA
HWAGRTYVEIDRFFPSSKRCNGCGFVKANMPLDVRSWECPECGATHDRDVNAARNILAAG
LAVLAFGENVSGDGISVSLSCSR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgccaacgaaacgcgcctacaaattccggttttacccagacctgcaacaagaaaagttg
ctggcgcagacgtttggttgtgtgcgttacgtgtacaacagcatcttgcgttaccgcacg
gatgcttacgatcaggctcaggaaaaggtcagttacctgggtgctaatgcgcggttgaca
gccatcaagaagctgcccgaacggctttttctgaacgacgtttccagtgttccgctgcaa
caatgcttgcggaaccaacaaaccgcgttcaagaacttttttgagggcagggcaaaatac
cctgtcttcaaatccaaaaagcaccgacagtcggcagaatttacttaccgtgcttttaca
ttccgcaacggtgaattgaagctggctaagtgcgctgtgccgttggacattcgatggagc
cagccacttcctgctgccccaaccactgtcaccgtgtccaaagatcaggccggacgctat
ttcgtgtcttgcttgtgtgaatttgaccccatgctgctgcccgtcaccgataaaaaggtg
ggcattgacgtgggcatcaaggatttgttcgtcacctctgacggttttaagtccggcaat
ccccgccataccgcccaacacgcggttaaactggcgaagtatcaacgccgtcttgccaag
aagaaacgcggcagcaagaaccggctgaaagctaaacgcaaggttgcccgtgttcacgcg
aagatttccgattgccgttcggacaacttgcacaaactgtcccgcagattaataaacgag
aaccaagtgatctgcgttgaaaacctcgccgtgaagaacatgattaagaacccgacactg
gccaagcacattgctgatgcaagctggggggaatttacccgccaactggcgtacaaagcc
cactgggcaggcaggacgtatgtcgagatcgaccgtttctttccttccagcaaacgctgt
aacggctgcgggttcgtgaaagcaaacatgccgctggacgtgcggtcttgggaatgcccc
gaatgtggcgcaacccacgaccgtgacgtgaatgcggcacgtaacattttagccgccgga
ctggcggtgttagcctttggagagaatgttagcggtgatggcatttcggtgtcgttgtcc
tgttctcgatga
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