Thiothrix lacustris: RCF98_04315
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Entry
RCF98_04315 CDS
T09396
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tlc
Thiothrix lacustris
Pathway
tlc03030
DNA replication
tlc03430
Mismatch repair
tlc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RCF98_04315 (dnaQ)
03430 Mismatch repair
RCF98_04315 (dnaQ)
03440 Homologous recombination
RCF98_04315 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tlc03032
]
RCF98_04315 (dnaQ)
03400 DNA repair and recombination proteins [BR:
tlc03400
]
RCF98_04315 (dnaQ)
Enzymes [BR:
tlc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RCF98_04315 (dnaQ)
DNA replication proteins [BR:
tlc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RCF98_04315 (dnaQ)
DNA repair and recombination proteins [BR:
tlc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RCF98_04315 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WML91573
UniProt:
A0ABY9MST9
LinkDB
All DBs
Position
complement(911849..912568)
Genome browser
AA seq
239 aa
AA seq
DB search
MSRQIILDTETTGLDPKDGHRIIEIGCVEMVNRRLTGRNFHEYLQPDREIDAGAIEVHGI
TNAFLADKPRFDEIMGDLLDYLRGAELIIHNAPFDIGFLNHELRLVNAKHQPLTDLCTVT
DTLRMARQLFPGQRASLDALCKRYEINNAHRTLHGALLDAEILADVYLAMTGGQVNLLLG
GEEDNTSGSVGGAGIRRVTADVSRLRVISASGDELAAHAERLSAITKAAGGKCLFAPDA
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtcagattattcttgataccgaaaccactggcctcgaccccaaagatggtcat
cgcattattgaaatcggttgtgtggaaatggtgaatcgtcgtttgacgggcagaaatttc
catgagtatttacagccagatcgtgaaattgatgctggggctattgaagtccatggcatt
accaatgcttttcttgcggataaaccgcgttttgacgagatcatgggtgatctactggat
tacttgcgtggggcagagttaattatccataacgcgcccttcgatatcggttttctcaac
catgaactgcgtttggtgaatgccaaacaccagccgcttaccgatttatgtaccgtcacc
gatacgttgcggatggcgcggcaactgtttccagggcagcgtgctagcttagatgcactg
tgtaagcgctacgaaatcaacaatgcccatcgtactttgcacggcgctttgctggatgct
gagatattggcagatgtctatctagctatgacaggtgggcaagtcaatctgctactcggt
ggtgaagaagataacactagtggcagcgttggtggagctggcatacgtcgcgtgacggct
gatgtgagtcgcttgcgtgttatttcagcgagtggcgacgaattagccgcacatgccgag
cgcttaagcgctatcaccaaagcggcagggggcaagtgtttgtttgcccctgatgcttag
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