Thiothrix lacustris: RCF98_04400
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Entry
RCF98_04400 CDS
T09396
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tlc03032
]
RCF98_04400
03036 Chromosome and associated proteins [BR:
tlc03036
]
RCF98_04400
03400 DNA repair and recombination proteins [BR:
tlc03400
]
RCF98_04400
DNA replication proteins [BR:
tlc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RCF98_04400
Chromosome and associated proteins [BR:
tlc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RCF98_04400
DNA repair and recombination proteins [BR:
tlc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RCF98_04400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
DUF1390
DUF2267
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
WML92428
LinkDB
All DBs
Position
complement(924214..924501)
Genome browser
AA seq
95 aa
AA seq
DB search
MRKVSMNKSELIDAVAEKSGLTKTDTDKAFKAFVEVISDTLKNDDQVALVGFGTFLVRER
QARSGRNPRTGETISIASAKIPSFKAGKALKDAVN
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
ataaggaaagtttctatgaataaatcagaattgattgatgcagtagcagagaagtccggt
ttgactaaaactgatactgataaagcattcaaagcgttcgttgaagtcatcagtgataca
ctgaaaaatgacgaccaagtggcgttggttggcttcggtacgttcctcgtgcgtgagcgc
caagcgcgttctggtcgtaatccacgcactggcgaaacaatttctatcgcttctgcgaaa
attccttcatttaaagctggtaaagcacttaaagatgccgtaaactag
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