Thiothrix lacustris: RCF98_04795
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Entry
RCF98_04795 CDS
T09396
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
tlc
Thiothrix lacustris
Pathway
tlc00550
Peptidoglycan biosynthesis
tlc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RCF98_04795 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tlc01003
]
RCF98_04795 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tlc01011
]
RCF98_04795 (mrcB)
Enzymes [BR:
tlc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
RCF98_04795 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RCF98_04795 (mrcB)
Glycosyltransferases [BR:
tlc01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
RCF98_04795 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
tlc01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
RCF98_04795 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
Motif
Other DBs
NCBI-ProteinID:
WML91659
UniProt:
A0ABY9MSN2
LinkDB
All DBs
Position
complement(998884..1001331)
Genome browser
AA seq
815 aa
AA seq
DB search
MSQEVKQESSVWRFFKGLWATFSLFGRVFRILLLVALVLGLLLGIVYTLDLDEKVRDQFE
GRRWELPARVFARPLDMYEGQQLFADHLEEELKLLNYRSIDKPVETGQYQRQGNKFVINT
RGFQFAEDKEPARSIKVNVANGKIASLAYADGKNPLDLMRLEPVLIGNFYPRKNEDRVLV
RQKDVPPLLVSGLVAVEDRKFYEHQGVNPMAIGRAVVANLKAGHTVQGGSTLTQQLVKNF
YLTNERSWHRKLKEATMAFLLEMRYTKQDIMEAYLNEIHLGQDGDRAIHGFGLAAQFYFN
RPVWELKPDQIALLIGLAKGAGYYDPRMHPDRALERRNLVLQVMLREKAITQAVYEESVK
QPLGVSEKKPSGNSPFPAYLDLVRQQLQRDYKEEDVRSQGLMIFTAMDPIVQLTAETILQ
NRVGRLERAERIPKGKLNGALIISSVQGGEVMALVGSREVRYAGYNRALTAQRQIGSLVK
PAIYLAALGDPKKYNLATRISDGPVTVKLGSKKYWQPQNYDRSNMGAVTLLKAITLSRNT
PAVRVGVSVGLDKVVQTLHDLGIGGDIPAYPSILLGALEMAPIDVQQMYQTIAAGGSYSP
LKAIRSVMNPHGQVLTRYPLTVKQIASPEAADLLIYAMNQVTVVGTAKELGATLPSWKKV
AGKTGTTNDKKDSWFAGFSGQHVVTVWVGRDDNKPTNMTGGTGALKVWADLFKVLPTKPL
QVANSSRLVWIDVDQSTGLRFNPACGKAVRTPFIKGTQPQQMSYCAAPESATEVVEPVRD
AAAIPPATAKPVVAPVAVPAKKPADPAGWIDDLMK
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
ttgagtcaggaagtaaaacaggaatcgtcagtgtggcgtttctttaaggggctatgggct
accttttcactgtttggacgggtattccgtattctgttgctagtagccttagtgctgggt
ttgctgctgggtatagtttataccttggatctggatgaaaaagtccgcgaccagtttgaa
ggcaggcgttgggaattacccgcccgggtattcgcccggccactggatatgtacgaaggc
cagcaattattcgctgatcatcttgaagaagagctgaagttgctcaattaccgctctatt
gataagcctgttgaaaccggacaataccagcgtcaaggcaacaaattcgttattaatacc
cgtggtttccagtttgctgaggataaagagccagcacgtagcatcaaagtcaatgttgct
aatggcaaaattgcctccttggcctatgcggatggcaaaaatccgctggatctcatgcgc
ctagaacctgtactgattggcaatttctacccgcgtaaaaacgaagatcgagtgttggtg
cgccagaaagatgtgccaccactgctggtgagtggtttggtcgccgttgaagatagaaag
ttttacgagcatcagggcgtcaatccaatggcgattggcagagcagtagttgccaacctt
aaggcaggccatacggtacaaggtgggagcactctcacccagcagttggtgaaaaacttc
tatctcaccaatgagcgtagctggcatcgtaaactcaaagaagccacgatggccttcctg
ttggaaatgcgttacaccaaacaagacatcatggaggcctacctgaatgaaattcacctg
ggtcaggatggcgaccgtgcgattcatggctttgggctggctgcacagttttacttcaat
cgtccagtttgggaattgaaacccgaccaaatagccctgttgattgggttggctaaaggc
gcaggttattatgatccacgtatgcaccctgatcgcgccttggagcgtcgtaatttagta
ctacaagttatgctcagggaaaaagcgattactcaggctgtctacgaagagtctgtgaag
cagccgttaggtgttagtgagaagaagccgtctggtaatagcccgtttcccgcttatctg
gatctagtacgtcagcaattgcagcgtgactacaaggaagaggatgtacgcagtcaaggc
ttgatgatttttaccgcaatggatcctattgtgcagctaaccgctgaaaccatcctgcaa
aatcgagtcgggcgtttagaacgtgcagagagaatccccaaaggaaaactgaatggtgcg
ctcattatcagcagtgttcaaggtggggaagtcatggccttagtcggcagccgtgaggtg
cgttatgcaggttataatcgtgctttaaccgcacaacggcagattggttcccttgtcaaa
cccgcgatttacttggcagcactgggcgatccgaaaaaatacaatcttgccactcgcatc
agtgatgggcctgtgactgtaaagttaggttctaagaagtattggcaaccacaaaattac
gaccgttccaatatgggcgctgtgacgctgttaaaagccatcacgctgtctcgtaacaca
cccgcagtacgtgttggtgtgagcgttggtttggataaagtcgtacaaacgttacatgat
ttaggcattggtggtgacatacccgcttatccatcgattctgttaggcgctttggaaatg
gcacccatcgacgtgcagcaaatgtatcagacgattgcagccggtggttcatattctccg
ctgaaagcgattcgtagtgtgatgaatccacatggccaagtgctaacgcgttacccttta
acggtaaagcagattgccagtcctgaagcggctgatttactgatctatgcgatgaaccaa
gtaaccgtggtgggcacggcaaaagaactcggtgcaacgctacctagttggaaaaaagta
gcaggtaaaactggaacgaccaatgacaagaaagatagctggtttgctggtttttctggg
cagcatgttgtaacggtttgggttggacgtgatgataataaacccaccaatatgacgggt
ggtacaggtgcattgaaagtttgggcagatttgttcaaagtactgcctaccaagcccctt
caggtcgctaattcgtcacggttggtctggatcgatgttgatcagtctactggactgcgg
ttcaatccggcctgtggtaaggcagtacgtacccctttcattaaagggactcagcctcag
caaatgagttactgtgcagcacccgagtctgctactgaagttgttgagcctgtcagagat
gctgcggctataccacccgcaacggccaaaccagtagtagcaccagttgccgtacccgca
aagaaaccggctgatccagcgggctggatcgatgacttaatgaaatga
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