Thiothrix lacustris: RCF98_04900
Help
Entry
RCF98_04900 CDS
T09396
Name
(GenBank) RNA-guided endonuclease TnpB family protein
KO
K07496
putative transposase
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
RCF98_04900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
AFG1_ATPase
Zn_ribbon_FGT1_2
Zn_ribbon_IS1595
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
WML92431
UniProt:
A0ABY9MWL5
LinkDB
All DBs
Position
complement(1017160..1018197)
Genome browser
AA seq
345 aa
AA seq
DB search
MHTRVRFPSPAPHSLSAYQIPIKVIKLPEVTFLNDVSSVPLQQCLRNQQTAFKNFFEGRA
KYPVFKSKKHRQSAEFTYRAFSYRDGELKLAKCDKPLNIKWSQALPADPTTVTVSKDQAG
RYVVSCLCEFEPTLLPVTDKKVGIDVGIKDLFVTSDGFKSGNPRHTAQHAVKLAKYQRRL
AKKKLGSKNRLKAKRKVARVHAKISDCRSDNLHKLSRRLVNENQVICAENLAVKNMIKNP
KLAKHIADASWGEFTRQLEYKSGWSGRTYVEIGRFFPSTKRCSCCGFVKENMPLDVRSWE
CPECGTTHDRDVNAARNILAAGLAVLAFGENVSGDGISVSSSCSR
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
ctgcatacgagggttcgattcccttcacccgctccacatagcctctctgcttaccaaata
cctatcaaagtcataaaactgcctgaagttactttcctgaacgacgtttccagtgttccg
ctgcaacaatgcttgaggaatcagcaaacggcgttcaaaaacttctttgaaggtcgggca
aaataccctgtcttcaaatctaaaaagcaccgccaatcggctgaattcacgtaccgcgcg
ttcagctaccgtgacggtgaattgaaactggcgaagtgcgataaaccgctgaatatcaag
tggagtcaggcacttccggctgaccccaccacggttactgtttccaaagatcaggccgga
cgctatgttgtgtcttgcttgtgtgaatttgaacccacgctgttgcctgtcaccgataaa
aaggtgggcattgacgtgggcatcaaggatttgttcgtcactagcgacggcttcaagtcc
ggcaatccccgccacaccgcccaacacgcggttaaacttgcgaagtaccaacgccgtctt
gccaagaagaaactcggcagcaagaacaggttgaaagctaaacgcaaggttgcccgtgtt
cacgcgaaaatctccgattgccgttcggacaatttgcacaagttgtcccgcagattagtt
aacgagaaccaagttatctgtgctgaaaacctcgccgtgaagaacatgattaagaacccg
aaactagccaaacacattgctgatgcaagctggggcgaatttacccgacagcttgaatac
aagtctggttggtctggcaggacatacgttgagatcgggcggtttttcccgtccactaaa
cgctgttcctgctgtgggttcgtgaaagaaaacatgccgctggacgtgcgatcgtgggag
tgccccgaatgcggcacaacccacgaccgtgacgtgaatgcagcacgtaacattttagcc
gccgggctggcggtgttagcctttggagagaatgttagtggcgatggcatttcggtgtcg
tcgtcctgttctcggtga
DBGET
integrated database retrieval system
