KEGG   Thiothrix lacustris: RCF98_05570
Entry
RCF98_05570       CDS       T09396                                 
Symbol
sctD
Name
(GenBank) type III secretion system inner membrane ring subunit SctD
  KO
K03220  type III secretion protein D
Organism
tlc  Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:tlc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tlc02044]
    RCF98_05570 (sctD)
Secretion system [BR:tlc02044]
 Type III secretion system
  Type III secretion core apparatus
   RCF98_05570 (sctD)
SSDB
Motif
Pfam: Yop-YscD_cpl Y4YQ_C Yop-YscD_ppl_2nd Yop-YscD_ppl_1st Yop-YscD_ppl_3rd FHA T2SSC T2SSB MU2_FHA
Other DBs
NCBI-ProteinID: WML91806
LinkDB
Position
complement(1143451..1144836)
AA seq 461 aa
MAIQQTSFVLKVLSGINTGASVRLKTGSLVIGRAMTSDIILHDENIADQHVQLLITSAGI
TLQPLARPVFVGGAEVTDASIDLLPYQSVKLGNVDFLVTDSRVAPPQAKHKSADVAVNLK
GVDASGVMATARVEQPKKSARAARPSSVQKTGGRVWLLLLGLSLLLLANALYWTPQFKHL
LESLGMRESGEQQAANLMQDLGKQDFKLVKEADGSVSLSGYTNTVLERNELMSKIQSAGI
KANLHIWAQDEMANNANMIARAMGQSALHFKSGSTDGVLVAQGFVSKTADWERVKATILN
DVGGIRSISEGEFQTMDGYLASFVQFIEKKGLSSRINATTDGKSVIVNGELTQPEIKKLK
GFLNEFNKLQDEGPAVVLKVSDVRDRIKLSIRSVSVGQVPFMVSKDGKKYMEGSTLGDKY
FVKSIQSDHVILTNNGIDIPFYYGIEKGRNNDAANRAEPQK
NT seq 1386 nt   +upstreamnt  +downstreamnt
atggctattcaacagacttcatttgtactcaaagtactgagtggcatcaatacgggtgca
tctgttaggttaaaaacaggtagtctagttattggtcgtgccatgactagtgatattatt
ttacatgatgaaaacattgctgatcagcacgtacagttattaataacctctgcgggcatt
acgcttcaacctttggctagacctgtgtttgtggggggggcagaggtcacagacgctagt
attgatttacttccctatcagtcggtcaagctaggtaatgttgattttttggtgacagat
agtcgtgttgcgccaccgcaggcaaagcataaatctgctgatgtggcagtcaacctcaaa
ggcgtggatgcatcaggtgtcatggctacggctagagttgagcaacctaaaaaatctgct
cgagcagcacgtccctcatctgtacaaaagacaggtgggagggtgtggctgttactcctc
ggcttgagtttgctcttgcttgctaacgctctctattggactccccagttcaagcatttg
ttagaaagcttgggtatgcgcgaatcgggagagcagcaagcggctaatctgatgcaagac
ttaggtaagcaagatttcaagttggtaaaagaggctgatggttcggttagcttgagtggt
tatacaaatacggtactagagcgcaatgagctgatgagtaagattcagagtgctggcatc
aaggctaatcttcatatctgggcgcaagatgagatggcgaataatgcaaacatgattgca
cgagcaatggggcaatctgccctgcatttcaagtcgggtagtactgacggtgtcttggtt
gcacagggctttgttagcaagacggctgattgggagcgggtcaaggcaacgatcctaaat
gatgtcggtggtattcgctccattagtgaaggtgagttccagacaatggatggttatttg
gcttcatttgtgcagttcatcgagaaaaaaggactttccagccgtatcaacgccacaact
gatggtaagagcgttatagtcaacggcgagttaactcagccagaaatcaaaaaattaaaa
ggttttttgaatgagttcaacaaacttcaagatgaaggccctgctgttgtattgaaggtt
agtgatgtacgagatcgtattaagctatcaatacgcagtgtaagtgttggtcaagtaccg
tttatggtatctaaagatggcaaaaagtatatggaaggttcaacactcggtgataaatac
tttgttaagtccatccagtctgatcatgtgatcttaacgaataatggaatagatattcct
ttttattacggtatagaaaaggggagaaataatgatgctgcaaatcgagcagaacctcag
aaatga

DBGET integrated database retrieval system