Thiothrix lacustris: RCF98_06135
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Entry
RCF98_06135 CDS
T09396
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase family protein
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
tlc
Thiothrix lacustris
Pathway
tlc00550
Peptidoglycan biosynthesis
tlc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RCF98_06135
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tlc01002
]
RCF98_06135
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tlc01011
]
RCF98_06135
Enzymes [BR:
tlc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RCF98_06135
Peptidases and inhibitors [BR:
tlc01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
RCF98_06135
Peptidoglycan biosynthesis and degradation proteins [BR:
tlc01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
RCF98_06135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
DUF6206
Tab2-like_C
Motif
Other DBs
NCBI-ProteinID:
WML91915
LinkDB
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Position
complement(1269798..1271039)
Genome browser
AA seq
413 aa
AA seq
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MLIRIVKSLLLVWLLVGCFAVAAEKPAAPSDGGEAPSDLSTAPYNDPAIPPEIIAMASGV
PEVEAKNYLLVDFQSGEELAGLNPGLRIEPASITKLMTAYIVYRDLDKGRVKLEDEVLIS
EKAWKMEGSRMFVELGKKIPFEKLLRGMIIQSGNDAAMALAEHIAGTESSFVERMNQTAA
ELGMKDTHYMNVTGWPAQNHYTTARDIVKLVHALITEFPERYKLYSEKEFSYNNIKQQNR
NRLLFRDPTVDGLKTGHTESAGYCLVSSAKRDNMRLISVVLGTKSDEARANASQQLLEYG
FRTFETHQLYNAGAVLAKVRVWKGDQTEVPAGVIDDLFVSIAKGRYDQLKGGMQLDKGID
APIMRGDRLGTVIITDRELGKIVKETPLLALEDVAEGGWWRGMMDSIQKLFAD
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcttattaggattgtgaaatcgttgttgctggtatggttgcttgttgggtgttttgcc
gtcgcggccgaaaagcccgctgcaccatctgatgggggtgaagctcccagtgacttatca
actgcaccttacaatgaccctgccattccaccagaaatcattgcgatggcttcaggtgtg
ccagaagttgaagcaaaaaactacttattggttgattttcaaagtggtgaagagcttgct
ggtcttaatcccggcctacggattgagcctgccagtattactaaattgatgacagcctac
atcgtctatcgggatttagataagggtagggttaagctggaagatgaggtgctgattagc
gagaaagcctggaagatggaaggttctcgtatgtttgtcgagttgggtaaaaagattcca
ttcgagaagctgttgagaggcatgattattcagtctggtaatgatgctgcaatggctttg
gcagaacatattgcgggtactgaaagttcttttgtcgaacgtatgaatcaaacagctgcc
gaacttggcatgaaagatactcattacatgaatgttacgggttggccagcccaaaatcat
tacacaacagcacgtgatattgtgaagttggttcatgccttgattactgagttccctgag
cgctataaactttattctgaaaaggagtttagttataacaatatcaagcagcaaaatcgc
aatcgtttattatttcgtgatcctactgttgatggtttaaaaacgggtcatacagagtcg
gcgggttattgtttagtttcttctgctaaacgcgacaatatgcgtcttatttctgtcgtg
ttaggcactaaaagtgatgaagcgcgtgcaaatgctagccaacagttattggaatacggt
ttccgtacttttgaaacacatcagctctacaatgccggtgctgtactggctaaagtgcgt
gtttggaagggtgatcaaaccgaggttcctgctggtgtgattgatgatttgttcgttagc
attgctaagggacgttatgatcagttgaaaggtggaatgcagcttgataaaggtattgat
gcccccattatgcgtggtgacagattgggaacagtgattattactgatcgtgagctgggt
aaaattgtcaaggaaaccccgttgttggcgctggaagatgtggctgagggcggctggtgg
cgagggatgatggatagtatccagaagttgttcgctgattag
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