Thiothrix lacustris: RCF98_06155
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Entry
RCF98_06155 CDS
T09396
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
tlc
Thiothrix lacustris
Pathway
tlc00550
Peptidoglycan biosynthesis
tlc01100
Metabolic pathways
tlc01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RCF98_06155 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RCF98_06155 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tlc01011
]
RCF98_06155 (mrdA)
Enzymes [BR:
tlc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RCF98_06155 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
tlc01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RCF98_06155 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Stimulus_sens_1
Motif
Other DBs
NCBI-ProteinID:
WML91919
LinkDB
All DBs
Position
complement(1274363..1276390)
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AA seq
675 aa
AA seq
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MSDRPIKLERDEQHMFNVRAIVAGIIILFALLAILGRVYQLQVSQHEQYSELSRQHYEKR
IPIPPNRGQIYDRNGVLLADSHTQYVLEVVRDNIGDENGDGRSTLADVDVFIARLGAIIP
LQEKDIRLFKTQVRRFKYQPIPIRVNLTEEEIAVFAVNRPRFPGVSMEVRMERYYPLINT
ASHVIGYVGRIDARDLERVDKDEYIGTTHIGKSGVEASHEDRLHGQAGYHLIEVDAHGKK
QSVISEQEPIGGQDLFLGLDINLQIQAEKLLGAERGAIVAMDPSNGEVLALASMPTFDPN
LFIDGISQKDYTSLRDDPDRPLFNRALQGTYPPGSTIKPMVGVAGLAERVVTPGSRVYDP
GFFRLSGQKHVFRCWNKRGHGSVDLKYAIQQSCDTYFYDLAYRMGIDRFSSFMSRFGFGE
KTGIDLPSEAAGLMPSKEWKERRYKRSWFPGDTVNIGIGQGYWISTPLQLAHAVSIVANH
GIRLKPHVLRGVRTTRNEEEKLLKPEPFAPIEVDQRFWNLAIQGMENVMRPGGTARAAGA
GAAYRIAGKTGTAQVFGLSGGKYNAGRLAKRLRDHALFVGFAPVDNPKIAVAVIVENSSG
SGGHTAAPIGRKLMDAYLLQQYGENMLKPAGVVGVSPEPEPEPVVSKTEKSTKKVTKKSQ
SKTKEKLKKVRGARD
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatagaccaattaaactggagcgcgatgagcagcacatgttcaatgtgcgtgct
attgtggcgggcattattatcttgtttgccttgttagcgatcctggggcgggtttaccag
ctccaggtttcgcagcacgaacaatattcagaactttcccgccaacactatgagaagcgt
attcccattccaccgaatcgcggtcaaatttatgatcgtaatggtgttctattggcagat
agtcacacgcagtatgttctcgaagtggtgcgagataatattggtgatgagaatggtgat
ggccgttcaacattggcagatgttgatgttttcattgctcgtcttggggcgattattcct
ttgcaagaaaaggatattcgcctgttcaaaacacaggtgcgccgcttcaaataccagccc
attcctattcgtgtcaatctgacggaagaggaaattgctgtatttgctgtcaatcgtcca
cgctttccaggcgtcagtatggaagtccgcatggagcgctattaccctttaattaatacg
gctagtcatgtcattggttacgttggtcgtatcgatgcgcgtgatttggaacgtgttgat
aaggatgagtacattggtacgacccatattggtaaatctggtgtagaagcttctcatgaa
gatcgtttgcatggtcaggctggttatcatctgattgaggtggatgcgcacggtaaaaag
cagtcagttatcagtgagcaagaacctatcggtgggcaggatctgtttcttgggctggat
attaacctgcaaattcaagcagagaagttattgggtgcagagcgtggcgctattgttgcc
atggatcctagtaatggtgaggtattagcattagcgagtatgcctacctttgacccgaat
ttgttcatcgatggtatttctcagaaagattacacctcgttgcgtgatgatcctgatcgt
ccattatttaaccgagctttgcagggaacgtatccaccaggttctacgattaagccaatg
gtgggtgtggctggtttagctgaacgagtggttacgcctggatctcgtgtttatgatcct
ggttttttccggttatcggggcaaaagcatgtgtttcgttgttggaacaagcgcggtcat
ggctcagttgacttgaaatacgcgattcaacagtcatgcgatacctatttttatgacttg
gcttatcgtatgggtatcgatcgtttctcgagttttatgagtcgttttggttttggtgag
aagacgggtattgaccttccttctgaggcagctggccttatgccaagtaaagagtggaaa
gaaaggcgctataaacgtagttggtttcctggtgatacggtcaatattggtatcggtcag
ggatattggatatctactccgttgcaactggctcatgctgtatccattgtggcaaatcat
gggattcgtttgaaaccgcatgttttacgtggagtacgtacaacacgcaatgaagaagaa
aagctactcaagcctgagccttttgcgcctattgaagtcgatcagcgtttttggaatttg
gccatacagggtatggaaaacgttatgcgccccggtggtaccgcgagggctgctggtgct
ggtgctgcgtatcgaattgcgggtaaaacggggacagcgcaagtgtttggcttgtctggt
ggtaaatataatgcgggacgcttggctaagcgtttacgtgaccatgcgttatttgtaggc
tttgcaccagtagataacccgaaaattgcggttgccgttattgttgaaaattcatcggga
agtggtggacatactgccgctccgattggacgtaagttgatggatgcttatttgctacag
caatacggggagaatatgttaaagcccgcaggcgtggttggagtatctccagaacctgag
ccagaacctgtagtatcaaaaaccgaaaaatccacgaagaaagtgactaaaaaatctcaa
agtaagacgaaagaaaagctaaaaaaagtaaggggtgcgcgtgattaa
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