Thiothrix lacustris: RCF98_06170
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Entry
RCF98_06170 CDS
T09396
Symbol
rsmI
Name
(GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tlc03009
]
RCF98_06170 (rsmI)
Enzymes [BR:
tlc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
RCF98_06170 (rsmI)
Ribosome biogenesis [BR:
tlc03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RCF98_06170 (rsmI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
Motif
Other DBs
NCBI-ProteinID:
WML91922
LinkDB
All DBs
Position
complement(1277670..1278512)
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AA seq
280 aa
AA seq
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MKQGILYCVATPIGNLADMTERGKRILSEVDKVYAEDTRVTRGLLTHYGIQNTLASLHDH
NEADRVASIRAELDQGMQLALVSDAGTPLISDPGYKLVHALGESGHTVVPIPGASALIAA
LSVAGLPTDRFVFEGFLPAKSVSRRKLLEGVREEPRTLVFYESSHRIADMLADVVATLGE
ERRVVILRELTKLFESIYRGSAGDLLQQMATDTNMSRGEFVVVIAGNVVTEDQEQLSALR
ADSILAVLLEELPVKQAAAIAARLTGLPKNQLYKQALAMG
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtattttgtactgcgtggcaacgccgattggtaatttggcggatatgacc
gagcgaggtaagcgtatcttgtcggaagtcgacaaggtttacgcagaagatacgcgggtc
acgcgcggtttgctgacccattacggtatccagaataccttggcaagtttgcatgaccat
aatgaagcggatcgggtggcgagtatccgtgccgagttggatcaggggatgcaactggct
ttggtgagtgatgcgggcacgccgttgatcagtgaccccggttacaagttggttcatgct
ttgggggagtcagggcataccgtggtgccgattccgggggcaagtgccttgattgcggca
ttgtcggtggcggggttgccgacggatcgttttgtgtttgaaggatttctgcctgcaaaa
tcggtttcgcgccgtaagttattggaaggggtgcgcgaggaaccgcgtactttggtgttt
tacgagtccagccatcggattgcggatatgttggcggatgtggtggcaacgctgggtgag
gaacgccgggtggtgatcttgcgggagttgaccaagttgtttgaaagcatttaccggggc
agtgccggggatttgttgcagcaaatggcaaccgataccaatatgtcacgcggtgagttt
gtggtggtgattgcgggcaatgtggtgacagaggatcaggagcagcttagtgctttgcgt
gccgacagtattctggcggtgttgctggaggagttgccggtgaaacaggcagcagcgatt
gctgcccgtttgacgggattgcctaagaatcagttgtacaaacaggctctggcgatgggg
taa
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