Thiothrix lacustris: RCF98_06435
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Entry
RCF98_06435 CDS
T09396
Symbol
gatB
Name
(GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
tlc
Thiothrix lacustris
Pathway
tlc00970
Aminoacyl-tRNA biosynthesis
tlc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RCF98_06435 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tlc03029
]
RCF98_06435 (gatB)
Enzymes [BR:
tlc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
RCF98_06435 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
RCF98_06435 (gatB)
Mitochondrial biogenesis [BR:
tlc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
RCF98_06435 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
WML91973
LinkDB
All DBs
Position
complement(1328881..1330311)
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AA seq
476 aa
AA seq
DB search
MEWETVIGLEIHAQLSTNSKIFSGSSTAYGAEANTQANLVDLGMPGVLPVLNKKAVELAI
RLGLAIDAEITQRSIFARKNYFYPDSPKGYQISQYELPIVGLGHMDIQLENGETKRIGIT
RAHLEEDAGKSLHEDFQGQTGIDLNRAGTPLLEIVSEPDMRNAKEAVAYMKKLHALVRYL
GVGDGNMQEGSFRCDANVSVRRPGQPFGTRAEIKNLNSFKFIERAINHEVERQIDIIESG
GTVVQETRLFDPDRDETRSMRSKEDANDYRYFPDPDLLPVVITPEDIEAVRATLPELPDA
KKQRFMSEYALTDYDASLLTQSREVADYFEAVAQGCGDAKLAANWVNGEVSKTLADHDLD
ITAAPVSSAALVELLQRIQDNTVSNKIAREVFEAMWKGEGSADAVIDQKGLKQITDTSAI
EAMIDEIIAKNPGQVAEYRSGKDKLFGFFVGQAMRASKGKANPNTLNDILKQKLEG
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggaatgggaaaccgttattggtctggaaattcacgcccagctttccaccaattcaaag
attttttcgggttcatccacggcttacggggcagaagccaatacacaggccaatctggtc
gatttggggatgccgggtgttttgccggtcttgaacaaaaaggcggtggaactggcgatt
cgtttgggtttggccattgatgctgaaattacccaacgttcgattttcgcgcgtaaaaac
tacttttacccggattcacccaaaggctaccaaatcagccagtatgagctgcccatcgtt
ggcttaggccacatggacatccaactggaaaatggtgaaaccaagcgtatcggcattacc
cgcgcccatctggaagaagatgcgggcaaatcgctgcacgaagatttccaagggcaaacc
gggatcgacttgaatcgtgcaggcacgccgttgctggaaatcgtttccgaacctgatatg
cgcaatgccaaagaagccgtggcttacatgaaaaagctgcacgcgctggtgcgttacctc
ggtgtcggcgatggcaatatgcaggaaggttcgttccgttgcgatgccaacgtctcagtg
cgccgccccggtcagccgtttggtacacgcgctgaaatcaagaacctgaactcgttcaag
ttcattgaacgcgccatcaaccacgaagtagaacgccagatcgacattatcgagtccggc
ggcacggtggtacaggaaacccgtttgttcgacccggatcgcgacgaaacccgttcgatg
cgtagtaaggaagatgccaacgactaccgttacttccccgaccctgatttgctgccggtg
gttattaccccggaagacattgaagccgtgcgggcgacgctgccggaattgccggatgcc
aaaaaacagcgttttatgagcgaatacgcgctgaccgactatgacgccagcctgctgacg
caaagccgtgaagtggcggattatttcgaggcagtcgcgcaagggtgcggtgacgccaag
ctcgccgccaactgggtgaatggcgaagtcagcaaaaccttggcggatcacgatctggat
attaccgcagcgccagtcagcagtgcggctttggtggaattgctccagcgcattcaggac
aacaccgtttccaacaagattgctcgcgaagtgttcgaggcgatgtggaagggtgaaggt
tctgccgatgcggtcatcgaccagaaaggcttgaagcaaatcaccgataccagcgcgatt
gaagcgatgattgacgaaatcattgccaaaaatccggggcaggtagcggaataccgcagc
ggtaaagacaagctgtttggtttctttgtgggacaagcgatgcgtgcttccaaaggcaag
gctaaccccaacaccttgaacgacatcctcaaacaaaagctggagggctga
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