Thiothrix lacustris: RCF98_06505
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Entry
RCF98_06505 CDS
T09396
Symbol
ycaO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tlc03009
]
RCF98_06505 (ycaO)
Ribosome biogenesis [BR:
tlc03009
]
Prokaryotic type
ribosomal protein modification factors
RCF98_06505 (ycaO)
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Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
WML91987
UniProt:
A0ABY9MU67
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Position
complement(1348495..1350228)
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AA seq
577 aa
AA seq
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MQAQTFIPGKDAALETSTALMQEKLHKLGFNIEEASWLNPVANVWSVHIRDRDCPMLFTN
GKGSSAKAALASALGEYFERLSTNYFWADFYLGKTIATSNFVHHPQEKWFGLDDSGNLPA
GLLDDDTLSFYDPESALDASKLVDLNSGNEERGICALPYVRQRDAEVVWFPVNVIGNLYV
SNGMSAGNTKTEARTQALSEIFERHIKFRIIAEGICLPDVPEAVIARYPSIQAGIQALRD
AGFGILVKDASLGGEYPVMCVTLLNPDDQGCYASFGAHPRFEVALERALTELLQGRALDR
LSGFSEPSFEQDDVASPQNLETHFIDSSGPIHWDFLWSEPDHEFVDWDFSGTTEEECEYL
LERIHAEDFDVYIMDYEHLGVYACRIIVPEMSEIYQIEDLEWDNNSTGNAVREAILHLPD
LDDEECTELFDTIEELGLDDHQPVAALIGLAPDAGSLWADLRVGELKTLLALVMHDEDAI
REGCQWIRHFEQISDERRRVYRCIEALLDMDDMEGYSPNIGLLYGANALQQAQGLLDGSL
RFWGMMAPTLELHGCETHQSLLAAYRKVHPTLTLASD
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcacaaacctttattccgggaaaagacgccgctctggaaacttcgacagcactt
atgcaagaaaagttacacaagctgggcttcaatattgaagaagcctcgtggctgaacccc
gttgccaatgtctggtcggtgcatatccgtgaccgtgactgcccgatgttgttcaccaat
ggcaaaggttcgtcagccaaagcggccttggcgagtgccttgggcgaatacttcgagcgt
ctcagcaccaactatttctgggctgatttttatctgggtaaaaccattgcgaccagcaat
tttgtacaccaccctcaagaaaaatggttcggactggatgacagcggcaacttgccagca
ggcttgttggatgacgataccttaagcttttacgaccccgaatctgcactggatgccagt
aagctggttgatctaaactctggcaatgaagagcgcggtatttgtgcgctaccctatgtg
cgccaacgtgatgctgaagtggtgtggttcccggtcaatgttatcggcaacctgtacgtc
agtaacggtatgtcggcgggtaataccaagacggaagcgcgtacccaagccctgtctgaa
atttttgagcgccatatcaagtttcgtattatcgctgaaggaatctgtctgcccgatgta
ccggaggcggttattgcccgttatccatcgattcaggcgggtattcaggcattacgtgat
gctggatttggcattctggttaaagatgcatcacttggcggcgagtacccggtgatgtgt
gtcacgttgctgaacccggatgaccaaggttgttacgcgagtttcggtgcgcacccccgt
tttgaggtggcgctagaacgtgccttgaccgaattattgcagggtagggcgctggataga
ctgtcaggtttctctgagcctagctttgagcaggatgatgtggctagcccacaaaatctg
gaaacccatttcattgattccagtggcccgattcactgggattttctgtggagtgagcct
gaccatgaattcgtcgactgggatttcagcggcacgactgaggaggaatgcgagtacttg
ctggagcgcatccacgctgaagatttcgacgtttatatcatggattatgaacatctgggg
gtgtatgcctgccggattattgtgccggaaatgtccgagatttatcagattgaagatctg
gagtgggataacaacagtacaggtaatgcggtgcgtgaagctatcctgcacttgccagat
ttggatgatgaggaatgcaccgaattgttcgatacgatcgaagagttgggcttggatgac
catcagccggttgcggcattgatcggacttgcgccagatgcgggttccttgtgggcagat
ttgcgggtaggtgagttgaaaaccctgttggcgctggtgatgcatgatgaagatgctatt
cgcgaaggttgccaatggattcgccatttcgagcagattagcgatgagcgtcgtcgggtg
taccgctgcatagaagcgttgttggatatggatgatatggaaggttattcgccgaatatt
ggtttgttgtatggtgcaaacgcgctgcaacaggcgcaaggcttgctggatggcagcttg
cgtttctggggaatgatggcgccaacgctggagttacatggctgtgagacgcatcaaagc
ctgctggcagcgtaccgtaaggttcaccctaccttaaccttggcaagcgattga
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