Thiothrix lacustris: RCF98_06650
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Entry
RCF98_06650 CDS
T09396
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
tlc
Thiothrix lacustris
Pathway
tlc00051
Fructose and mannose metabolism
tlc00541
Biosynthesis of various nucleotide sugars
tlc01100
Metabolic pathways
tlc01250
Biosynthesis of nucleotide sugars
Module
tlc_M01006
GDP-D-Rha4N biosynthesis, Fru-6P => GDP-D-Rha4N
tlc_M01016
GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
RCF98_06650 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RCF98_06650 (gmd)
Enzymes [BR:
tlc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
RCF98_06650 (gmd)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NmrA
Motif
Other DBs
NCBI-ProteinID:
WML92015
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Position
complement(1381182..1382330)
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AA seq
382 aa
AA seq
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MSKTALITGITGQDGAYLAEFLLKKGYTVHGIKRRSSSLNTDRIDHLYQDPHSSDGKFVL
HYGDMTDSMNLTRIIGQVQPDEIYNLAAMSHVHVSFDMPEYTANADGIGTLRILEAVRFL
NLTKKTRIYQASTSELYGLVQEVPQKETTPFYPRSPYAVAKLYAYWITVNYREAYGMFAC
NGILFNHESPLRGETFVTRKITRAASRIALGLQKDLHLGNLSAKRDWGHAQDYVEMMWLI
LQADVPEDFAIATGVTTEVREFVRMSFARAGIKIDFQGEGVDEKGVIAGFDLAVYDAAVG
GTPEQHGLEVGREVVSVDPRYFRPTEVELLIGDPTKAKEKLGWVPKHDLNSLVNDMMESD
LKLMLKEKHLKDHGHRIMSYHE
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacggctttaattactggtatcactggtcaagacggtgcttacctagctgaa
tttttgttaaaaaagggctatacggtacacggaatcaagcgtcggtcttcatcgctgaac
actgaccgtatcgaccatctgtaccaagatccacattcatccgatggtaaattcgtgttg
cattacggcgacatgaccgacagcatgaacctgacccgcattatcggccaggtgcaaccg
gatgagatctacaacctcgcagcgatgagccacgttcacgtctcatttgatatgcctgaa
tacaccgccaatgcggatggtatcggcacactgcgtatccttgaggcggtacgtttcctg
aatctgaccaaaaaaacccgtatttatcaggcatccacgtctgaattgtatggtttggtg
caagaagtaccacaaaaggaaaccaccccattctacccgcgctcaccttacgcggttgcc
aagttatacgcttactggatcaccgttaactaccgcgaagcctatggcatgtttgcgtgt
aacggcatcctgttcaaccatgaatcacccttacgtggtgaaactttcgtaacccgtaaa
attacccgtgcggcttcccgcattgcgttgggtttacagaaagatttgcatttgggcaac
ctgtccgcgaaacgtgactggggtcatgcacaagactacgtggaaatgatgtggttgatt
ctgcaagccgatgtaccggaagactttgctattgcaactggtgtcaccacagaggtgcgt
gaatttgtgcgtatgtcttttgcacgtgcaggtatcaaaattgacttccagggtgaaggc
gttgatgaaaaaggtgtcattgctggttttgatctggctgtttatgacgcagccgttggc
ggtacacctgagcagcatggattagaagtaggccgtgaagtggtttctgttgatccacgt
tatttccgtccaactgaagtggaattgctgattggcgatccaaccaaggccaaggaaaaa
ttgggctgggttcctaaacatgatctgaattcactggtgaatgacatgatggaatctgac
ctgaagctgatgctgaaagaaaagcatctgaaagaccacggtcaccgcattatgtcttat
cacgagtaa
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