Thiothrix lacustris: RCF98_06695
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Entry
RCF98_06695 CDS
T09396
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
tlc
Thiothrix lacustris
Pathway
tlc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RCF98_06695 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tlc03400
]
RCF98_06695 (ruvB)
Enzymes [BR:
tlc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RCF98_06695 (ruvB)
DNA repair and recombination proteins [BR:
tlc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RCF98_06695 (ruvB)
RecFOR pathway proteins
RCF98_06695 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
AAA_16
TIP49
nSTAND3
AAA_14
Mg_chelatase
AAA_18
Rad17
AAA_2
RNA_helicase
NTPase_1
AAA_33
DUF815
Bac_DnaA
AAA_28
ABC_tran
AAA_17
AAA_24
NB-ARC
TsaE
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
WML92024
LinkDB
All DBs
Position
1391388..1392455
Genome browser
AA seq
355 aa
AA seq
DB search
MEKQTPHLLSPHTRHEETYADEHIRPRRLQDYIGQPIVREQMEIFIHAARHRGDALDHVL
IFGPPGLGKTTLSHIIAQEMGANLRQTSGPVLEKAGDLAALLTNLEPHDVLFIDEIHRLS
PVVEEILYPAMEDFQLDIMIGDGPAARSIKLDLPPFTLIGATTRAGLLTSPLRDRFGIVQ
RLEFYNVDDLAYIVQRASTIIGATIDADGAREIARRSRGTPRIANRLLRRVRDYVQVKGN
GLIDRDMADKALNMLNVDHQGFDHMDRRLLLAVMEKFDGGPVGVDSLAAAIGEERGTIED
VLEPFLIQQGFLMRTPRGRVATRRAWQHFGLNIPARLNPPDDSTNQEGTSLDLFE
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcaaacacctcaccttctttcaccgcatactcgacacgaagaaacttatgcg
gatgagcatatacgccctcgccgcctgcaagattacataggccaacctatcgtacgcgag
cagatggagattttcattcatgctgctcgacaccgaggagatgcactcgatcacgtcctg
atttttggccctccggggctaggtaaaacaacgctttcacacattatcgctcaggaaatg
ggcgctaatcttcgccagacatcagggccagtactcgaaaaagcgggagacctcgcagca
ctactaaccaatctagaaccacacgatgtactctttatagacgaaatccaccgacttagc
cctgtagtagaagaaatcctctaccctgctatggaagatttccaactcgacatcatgata
ggcgatggcccagcggcacgttccatcaagcttgatctcccacccttcacacttattgga
gcaaccactcgtgccggattactgacttcaccattgcgagatcgtttcggtattgttcag
cgtctagagttttacaatgtcgacgatcttgcctacatcgtacagcgtgcttcaaccatt
attggtgcgaccattgatgcagatggtgcacgagaaattgcccggcgttcacgtggcaca
ccacgtattgctaaccgcttactgcgacgggtgcgtgattacgtgcaagtaaaaggcaat
ggcctaattgatcgtgatatggctgacaaagccctcaacatgctcaacgtcgaccaccaa
ggcttcgaccacatggacaggcgcttactgctggctgttatggaaaaatttgacggcggt
cctgttggagtcgatagcctagctgccgccattggcgaagagcgaggtacgattgaagat
gtactcgaacccttcctaattcagcaaggctttctgatgcgcaccccacgcggcagggtt
gctactcgccgcgcttggcaacactttgggctaaatattcctgcacgcctcaacccacca
gatgacagcactaatcaggagggtacaagccttgacctatttgaatga
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