Thiothrix lacustris: RCF98_07220
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Entry
RCF98_07220 CDS
T09396
Name
(GenBank) RNA-guided endonuclease TnpB family protein
KO
K07496
putative transposase
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
RCF98_07220
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Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
AFG1_ATPase
Zn_ribbon_FGT1_2
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
WML92125
UniProt:
A0ABY9MTZ3
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Position
complement(1478694..1479845)
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AA seq
383 aa
AA seq
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MKTKRAYQFRFYPDPQQETLLAQTFGCVRYVYNSILRYRTDAYYQAQEKVGYTKASSQLT
AIKKLPEATFLNDVSSVPLQQCLRNQQTAFKNFFEGRAKYPVFKSKKHRQSAEFTYRAFS
YRDGELKLAKCDKPLNIKWSQALPAEPTTVTVSKDQAGRYFVSCLCEFEPTLLPITDKKA
GIDVGIKDLFVTSDGFKSGNPRHTAQHAAKLAKYQRRLAKKTLGSKNRLKAKRKVARVHA
KISDCRSDNLHKLSRRLVNENQVICAENLAVKNMIKNPTLAKHIADASWGEFTRQLAYKA
GWYGRTYVEIGRFFPSTKRCSCCGFVKENMPLDVRSWECPECGTTHDRDVNAARNILAAG
LAVLAFGENVSGDGISVSSSCSR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactaaacgcgcctaccaattccgattctacccagacccacaacaagaaacgttg
ctggctcagacgttcggttgtgtgcgctacgtttacaacagcatcttgcgttaccgcacg
gatgcctactatcaggctcaggaaaaagttgggtacacgaaagcgagttcccaactgact
gccatcaaaaaactgcctgaagctactttcctgaacgacgtttccagtgttccgctgcaa
caatgcttgaggaatcagcaaacggcgttcaaaaacttctttgaaggtcgggcaaaatac
cctgtcttcaaatctaaaaagcaccgccaatcggctgaattcacgtaccgcgcgttcagc
taccgtgacggtgaattgaaactggcgaagtgcgataaaccgctgaatatcaagtggagt
caggcacttccggctgaacccaccacggttactgtttccaaagatcaggccggacgctat
tttgtgtcttgcttgtgtgaatttgaacccacgctgttgcccatcaccgataaaaaggca
ggcattgacgtgggcatcaaggatttattcgttacctctgacggttttaaatccggtaat
ccccgccacaccgcacaacacgcggctaaactcgcgaagtaccaacgccgtcttgccaag
aagacactcggcagcaagaaccggttgaaagctaaacgcaaggttgcccgtgttcacgcg
aaaatctccgattgccgttcggacaatttgcacaagttgtcccgcagattagttaacgag
aaccaagttatctgtgctgaaaacctcgccgtgaagaacatgattaagaacccaacgtta
gccaagcacattgcggatgcaagttggggtgagttcactcgccagcttgcgtacaaagct
ggctggtacgggaggacatacgttgagatagggagattcttcccgtccactaaacgctgt
tcctgctgtgggttcgtgaaagaaaacatgccgctggacgtgcgatcgtgggagtgcccc
gaatgcggcacaacccacgaccgtgacgtgaatgcagcacgtaacattttagccgccggg
ctggcggtgttagcctttggagagaatgttagtggcgatggcatttcggtgtcgtcgtcc
tgttctcggtga
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