Thiothrix lacustris: RCF98_08365
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Entry
RCF98_08365 CDS
T09396
Name
(GenBank) RNA-guided endonuclease TnpB family protein
KO
K07496
putative transposase
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
RCF98_08365
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Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
Zn_ribbon_FGT1_2
Zn_ribbon_IS1595
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
WML92341
UniProt:
A0ABY9MWF9
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Position
complement(1735854..1737005)
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AA seq
383 aa
AA seq
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MKTKRAYQFRFYPDPQQETLLAQTFGCVRYVYNSILRYRTDAYYQAQEKVGYTKASSQLT
AIKKLPEATFLNDVSSVPLQQCLRNQQTAFKNFFEGRAKYPVFKSKKHRQSAEFTYRAFR
YRDGELKLAKCDKPLNIKWSQALPADPTTVTVSKDQAGRYFVSCLCEFEPTLLPVTDKKV
GIDVGIKDLFVTSDGFKSSNPRHTAQHAAKLAKYQRRLAKKTLGSKNRLKAKRKVARVHA
KISDDRSDNLHKLSRKLINENQVVCAENLAVKNMIKNPTLAKHIADASWGEFTRQLAYKA
GWYGRTYVEIGKFFPSTKRCSCCGFVKENMPLDVRSWECPECGTTHDRDVNAARNILAAG
LAVLAFGENVSGDGISVSSSCSR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactaaacgcgcctaccaattccgattctacccagacccacaacaagaaacgttg
ctggctcagacgttcggttgtgtgcgctacgtttacaacagcatcttgcgttaccgcacg
gatgcctactatcaggctcaggaaaaagttgggtacacgaaagcgagttcccaactgact
gccatcaaaaaactgcctgaagctactttcctgaacgacgtttccagtgttccgctgcaa
caatgcttgaggaatcagcaaacggcgttcaaaaacttctttgaaggtcgggcaaaatac
cctgtcttcaaatctaaaaagcaccgccaatcggctgaattcacgtaccgcgcgttcaga
taccgtgacggtgaattgaaactggcgaagtgcgataaaccgctgaatatcaagtggagt
caggcacttccggctgaccccaccacggttactgtttccaaagatcaggccggacgctat
tttgtgtcttgcttgtgtgaatttgaacccacgctgttgcccgtcaccgataaaaaggtg
ggcattgacgtgggcatcaaggatttgttcgttacctctgacggttttaaatccagtaat
ccccgccacaccgcacaacacgcggctaaactcgcgaagtaccaacgccgtcttgccaag
aagacactcggcagcaagaaccggttgaaagctaaacgcaaggtcgcccgtgttcacgcg
aaaatttccgatgaccgttcggacaacttgcacaagttgtcccgcaaactgattaacgag
aaccaagtggtttgtgctgaaaacctcgccgtgaagaacatgattaagaacccaacgtta
gccaagcacattgcggatgcaagttggggtgagttcactcgccagcttgcgtacaaagct
ggctggtacgggaggacatacgttgagatagggaaattcttcccgtccactaaacgctgt
tcctgctgtgggttcgtgaaagaaaacatgccgctggacgtgcgatcgtgggagtgcccc
gaatgcggcacaacccacgaccgtgacgtgaatgcagcacgtaacattttagccgccggg
ctggcggtgttagcctttggagagaatgttagtggcgatggcatttcggtgtcgtcgtcc
tgttctcggtga
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