Thiothrix lacustris: RCF98_08975
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Entry
RCF98_08975 CDS
T09396
Symbol
glgB
Name
(GenBank) 1,4-alpha-glucan branching protein GlgB
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
tlc
Thiothrix lacustris
Pathway
tlc00500
Starch and sucrose metabolism
tlc01100
Metabolic pathways
tlc01110
Biosynthesis of secondary metabolites
Module
tlc_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RCF98_08975 (glgB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tlc04147
]
RCF98_08975 (glgB)
Enzymes [BR:
tlc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
RCF98_08975 (glgB)
Exosome [BR:
tlc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
RCF98_08975 (glgB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase_C
GlgB_N
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
WML89107
LinkDB
All DBs
Position
complement(1850111..1852306)
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AA seq
731 aa
AA seq
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MKHYRDTSEMNENLRRIQQGTHHDPFDWLGWHPLPDGHWVLRSFMPAAEAVEIVGHGLMA
RLEGTDCFEARFPPSATPFASHPALSWQDKQAGNWHDAVCPYTFTPQIGDLDLHLLGQGR
HHHAWKVLGARFTEVDGVTGSLFAVWAPAVKRVSVIGDFNAWDGRRHPMRVRGDSGIWEI
FIPGLAAGTAYKYEILNRHDAIVVKTDPYAQQMFMRPETTSCVPVATPYVWQDGEWITAR
ETFDWQHKPLSVYELHPGSWRKHPDGRFYSWAELTATLIPYVTDLNYTHIELMPVAEHPL
DESWGYQVSGYYAPTARYGTPDDFRAFVDACHVAGLGVLLDWVPAHFPKDDFALAKFTGE
PLYEHADPRRGEHQDWGTLIFDFGRNEVKNFLISNALFWMDEFHIDGLRVDAVASMLYLD
YSRNAGEWLPNQYGGRENIEAIAFLREMNTVVHGYFPGILTIAEESTAWPAVSRPVEIGG
LGFSMKWNMGWMNDNLSYIEQNPVHRKYHHNLLTFSQVYSYSENFVLPLSHDEVVHLKHS
MLDKMPGDYWQAFANLRLFYAWHYAHPGKKLLFMGSEFGQWAEWNVKKELDWALCNFPAH
DSIRHLLRDLNHLYREQAALHHYDFDGRGFQWIDCHDSDQSVLSLIRHGENPADKLVILL
NFTPVPRYAYRIGVPAADHYREVLNTDSEYYGGSNCGNAGMIPVQAHPWMGFEHSVEVTL
PPLAALFLQAC
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgaaacactacagggacaccagcgaaatgaacgagaacttgcgtcggatacaacaaggc
acacatcacgacccgtttgattggctgggatggcatccgctaccggatggccactgggtg
ctgcgtagtttcatgcctgccgctgaagcggttgaaatcgtcgggcatggtctcatggca
cgcctggaaggtactgattgttttgaagcgaggtttcccccttcggctacccccttcgcc
tcgcatcccgccctaagctggcaggacaaacaagcaggtaactggcacgatgccgtctgt
ccctatacgtttacgccacaaataggcgaccttgacctgcacctcctcgggcaaggtcgc
catcaccacgcctggaaagtgctgggtgcacgtttcaccgaagtggatggcgtgaccggc
tcgctgtttgcggtgtgggcgccagcggtcaagcgtgtcagcgtgatcggcgatttcaat
gcgtgggatgggcggcgtcaccccatgcgggtacgcggcgattctggcatctgggaaatc
ttcatccccggtctggcagcaggcacggcttacaagtacgaaatccttaaccgtcacgat
gcgattgtggtgaaaaccgacccgtatgcacagcaaatgttcatgcgcccggaaaccacg
tcctgcgtacctgttgccacgccttacgtctggcaagatggcgagtggattaccgctcgc
gaaaccttcgactggcaacataagccactcagcgtttacgaattacaccccggttcatgg
cgcaagcaccccgacgggcgcttttattcatgggcagaattaaccgctacgctgatcccc
tacgtgaccgacctgaactacacccacatcgagctaatgccagtggcggaacacccgctg
gatgaatcatggggttatcaggtgtccggctattacgcccccaccgcgcgttacggcaca
ccggatgatttccgcgccttcgtggatgcttgccacgtagcggggctgggcgtgttgctg
gactgggttccggcgcatttccccaaagatgattttgcgctggcgaaattcaccggcgaa
ccgctctacgaacacgctgacccacgccggggcgaacatcaggactggggtacgctgatt
ttcgatttcgggcgtaatgaagtgaaaaacttcctgatttccaacgcgctgttctggatg
gatgaattccacatcgacggcctgcgggtggatgccgtggcctcgatgctgtatctggat
tactcacgcaatgccggggaatggctgcccaaccagtacggcgggcgcgagaatatcgaa
gcgattgccttcctgcgtgaaatgaataccgtggtgcatggctacttccccggcatactc
acgattgcggaagagtccaccgcatggcctgcggtatcgcgcccggtggaaatcggtggt
ttgggtttcagcatgaaatggaacatgggctggatgaacgacaacctgtcctacatcgag
cagaacccggtacaccgcaaataccaccacaacttgctgaccttcagccaagtgtattcc
tattcggaaaacttcgtactgccgctgtcccacgacgaagtggtgcatttaaagcacagt
atgctggataaaatgccgggggattactggcaagccttcgccaacctgcggctgttttat
gcgtggcattacgcacaccccggcaaaaagctgctgttcatgggcagtgaattcgggcag
tgggcagaatggaacgtgaaaaaggaactggattgggcactgtgcaacttcccggcacat
gacagcatccgccatttgctgcgcgacttgaaccacctgtatcgggaacaagccgcgtta
caccattacgactttgatgggcgcggcttccagtggattgattgccacgattctgatcag
tcggtgctgagcttgattcgtcacggggaaaaccccgccgataagctggttatattgcta
aactttacccctgtaccccgttacgcctaccgtattggggttcctgctgccgatcactac
cgcgaagtgctgaataccgattcggaatactacggcgggagcaattgcggcaatgcaggc
atgattccggtgcaagcccatccctggatggggtttgagcattcggtcgaagtaaccctg
ccgccactcgcggcgctgttcttacaagcgtgctga
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