Thiothrix lacustris: RCF98_09475
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Entry
RCF98_09475 CDS
T09396
Name
(GenBank) class I SAM-dependent methyltransferase
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tlc03009
]
RCF98_09475
Enzymes [BR:
tlc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
RCF98_09475
Ribosome biogenesis [BR:
tlc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RCF98_09475
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
Cons_hypoth95
UPF0020
Motif
Other DBs
NCBI-ProteinID:
WML89204
LinkDB
All DBs
Position
1958046..1958906
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AA seq
286 aa
AA seq
DB search
MNQRIYTQSWDDYELLDAGNGKKLERWGNILTIRPDVQAYFKPGTPYSEWRTLAHWEFIE
TDKHSGTWHALRDAAPTTWEIGYKHLRFRLELTRFKHLGLFPEQRSNWDFIAEHLPAEGR
FLNLFAYTGAASCVARQTGAETLHVDSIKQLLTWAHTNMERSGLADIKWVREDALKFVER
ELKRGRHYQGIIMDPPAWGLGTKGEKWKLDNKLEALLEGVQGLLAKDGFLILNTYSPTIG
LPEITRLAHQYFKPRDCEIRELWMQTSTGKPLFYGNLLRVVGNRSK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaacgcatttacacccaaagctgggatgattacgaactgctcgatgcaggcaat
ggtaaaaagctggagcgttgggggaacatcctcaccatccgccccgatgtgcaagcctat
ttcaagccgggtacgccttacagtgaatggcgcacgctggcgcattgggaattcatcgaa
accgacaagcattctggcacttggcacgccttgcgcgatgcggcacctaccacgtgggaa
atcggttataagcacctacgcttccgactggaattgacccgtttcaaacaccttggcctg
ttccccgaacagcgcagcaactgggattttattgccgaacatctgcctgccgaggggcgt
ttcctcaacctgtttgcgtataccggcgcagcatcatgcgtggcaaggcaaaccggggcg
gaaaccttgcatgtcgattccatcaaacaactgctgacgtgggcgcacaccaatatggag
cgcagcgggctggctgacattaagtgggtacgtgaagacgcactcaagttcgtcgaacgt
gaactcaagcgtggcaggcattatcaaggcattattatggacccgcccgcgtggggcttg
ggcacaaaaggcgaaaagtggaagcttgataataagttggaagccttgctggaaggtgtg
cagggtttgctggcgaaggatggtttcctgatccttaatacctattcgccgaccatcggc
ttgccggaaattacccggctggcacatcagtatttcaaaccacgagattgcgaaattcgc
gagttgtggatgcaaaccagcacgggtaaaccgttgttctacggtaatttgctacgggtg
gtaggcaatcgcagcaaataa
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