KEGG   Thiothrix lacustris: RCF98_09855
Entry
RCF98_09855       CDS       T09396                                 
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
tlc  Thiothrix lacustris
Pathway
tlc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tlc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RCF98_09855 (ung)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tlc03400]
    RCF98_09855 (ung)
Enzymes [BR:tlc01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     RCF98_09855 (ung)
DNA repair and recombination proteins [BR:tlc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     RCF98_09855 (ung)
 Prokaryotic type
     RCF98_09855 (ung)
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: WML89277
UniProt: A0ABY9ML45
LinkDB
Position
complement(2029980..2030663)
AA seq 227 aa
MKNMHITWQSALAAEFTQPYWQTLQDFLTREQAAGKTLLPPETMRFNALQATALDKVKVV
ILGQDPYPTIGHAHGLAFSVLPDVKPLPRSLQNINKELLEDVGVDNRQTGCLQAWADQGV
LLLNTVLSVEAGQAGSHQKQGWERFTDAVIQAVNQQAQPVVFVLWGGHAQKKAALIDASR
HLIIQSAHPSPLSARRGFFGSKPFSRANAFLQTQGREGIDWRISPEP
NT seq 684 nt   +upstreamnt  +downstreamnt
atgaaaaatatgcatatcacttggcagtcagcgcttgccgctgaatttacccaaccttat
tggcaaaccttgcaggattttctgacgcgggaacaagcagcagggaaaaccctcctgccg
ccggaaaccatgcgcttcaatgccttgcaagccactgctctagacaaggtgaaggtggtg
attttggggcaagacccctacccaaccatcggccatgcgcacggcttagcgttttcggta
ttgccagacgttaagcccttgccacgttccttgcagaacattaacaaggaattgctggag
gatgtgggcgtagacaatcgccaaacaggttgcctgcaagcgtgggcagatcagggcgtg
ttattgctgaataccgtgctgtcggtcgaagcaggtcaggcaggcagccaccagaaacag
ggctgggaacgtttcaccgatgcggtgattcaggcggttaatcaacaggcgcagccggtg
gtgtttgtgctgtggggtggtcatgcgcagaaaaaggcggcgttgattgatgcatcccgc
cacttgattattcagagcgcacacccttccccgctgtcggcacgacgcggcttttttggc
agcaagccgttttcgcgggcgaatgcatttttgcagacgcaggggcgtgaggggattgac
tggcggatttcccctgaaccttaa

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