Thiothrix lacustris: RCF98_10085
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Entry
RCF98_10085 CDS
T09396
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
tlc
Thiothrix lacustris
Pathway
tlc00300
Lysine biosynthesis
tlc00470
D-Amino acid metabolism
tlc01100
Metabolic pathways
tlc01110
Biosynthesis of secondary metabolites
tlc01120
Microbial metabolism in diverse environments
tlc01230
Biosynthesis of amino acids
Module
tlc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RCF98_10085 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RCF98_10085 (dapF)
Enzymes [BR:
tlc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RCF98_10085 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
WML92457
UniProt:
A0ABY9MUW1
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All DBs
Position
2072361..2073200
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AA seq
279 aa
AA seq
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MGNGELYFTKMHGLGNDFVVLDGISQSVNLSAAQIRQIADRHRGVGCDQLLLVEAYEGDD
AEFRYRIFNADGSEVEQCGNGARCFARFVYDQGLTQNTTIPVMTASGRIVLQIQPDGQVK
VNMGVPELTPAQIPFVSEQRQTLYTLDVKGAAVSLAAVSMGNPHAVLQVVALESAPVATL
GALLEVHPAFPKRVNVGFMQVVGRDAIRLRVFERGCGETLACGTGACAAVVAGRLQGLLD
DQVTVSLPGGDLQIQWQGEGQPVWMIGPAATVFRGTLIV
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacggcgaactttatttcactaaaatgcatggtctaggcaatgatttcgtggtg
ctggatggtattagtcagtcagtcaatttgagtgcagcgcaaatacgccagattgctgat
cgtcaccgtggcgttggttgcgaccagttgctgttggtggaggcttatgagggggatgat
gctgagttccggtaccgaatttttaatgccgatggcagcgaggtggaacagtgtggcaat
ggtgcacgctgttttgcgcgtttcgtgtatgatcagggtttgacgcagaacaccacgatc
ccggtcatgaccgccagcgggcgcattgtgttgcaaatccagcctgatgggcaggtgaaa
gtgaacatgggcgtgcctgagcttacgcctgcacagattccgttcgtttccgaacagcgc
caaacgctctatactctggatgttaagggtgctgcggtatcgctagcggctgtttcgatg
ggaaatcctcacgcggtgctgcaagtagtagcactggagtctgcgcctgttgcgacattg
ggggcgttgttggaagtgcatccggcattccccaagcgagtcaatgttggtttcatgcag
gtcgtcgggcgggatgccatccgcttgcgggtgtttgagcgcggttgtggcgaaacgttg
gcgtgtggtacgggtgcttgcgccgcagtggtggctgggcgcttacaaggtctgctggat
gatcaggtgacagtaagcttgcccggcggcgatttacagattcagtggcaaggcgaaggg
cagccggtatggatgatcggcccggcagcaacggtattcaggggaacactcatcgtatga
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