KEGG   Thiothrix lacustris: RCF98_10085
Entry
RCF98_10085       CDS       T09396                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
tlc  Thiothrix lacustris
Pathway
tlc00300  Lysine biosynthesis
tlc00470  D-Amino acid metabolism
tlc01100  Metabolic pathways
tlc01110  Biosynthesis of secondary metabolites
tlc01120  Microbial metabolism in diverse environments
tlc01230  Biosynthesis of amino acids
Module
tlc_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:tlc00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    RCF98_10085 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    RCF98_10085 (dapF)
Enzymes [BR:tlc01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     RCF98_10085 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF CntK_N
Other DBs
NCBI-ProteinID: WML92457
UniProt: A0ABY9MUW1
LinkDB
Position
2072361..2073200
AA seq 279 aa
MGNGELYFTKMHGLGNDFVVLDGISQSVNLSAAQIRQIADRHRGVGCDQLLLVEAYEGDD
AEFRYRIFNADGSEVEQCGNGARCFARFVYDQGLTQNTTIPVMTASGRIVLQIQPDGQVK
VNMGVPELTPAQIPFVSEQRQTLYTLDVKGAAVSLAAVSMGNPHAVLQVVALESAPVATL
GALLEVHPAFPKRVNVGFMQVVGRDAIRLRVFERGCGETLACGTGACAAVVAGRLQGLLD
DQVTVSLPGGDLQIQWQGEGQPVWMIGPAATVFRGTLIV
NT seq 840 nt   +upstreamnt  +downstreamnt
atgggaaacggcgaactttatttcactaaaatgcatggtctaggcaatgatttcgtggtg
ctggatggtattagtcagtcagtcaatttgagtgcagcgcaaatacgccagattgctgat
cgtcaccgtggcgttggttgcgaccagttgctgttggtggaggcttatgagggggatgat
gctgagttccggtaccgaatttttaatgccgatggcagcgaggtggaacagtgtggcaat
ggtgcacgctgttttgcgcgtttcgtgtatgatcagggtttgacgcagaacaccacgatc
ccggtcatgaccgccagcgggcgcattgtgttgcaaatccagcctgatgggcaggtgaaa
gtgaacatgggcgtgcctgagcttacgcctgcacagattccgttcgtttccgaacagcgc
caaacgctctatactctggatgttaagggtgctgcggtatcgctagcggctgtttcgatg
ggaaatcctcacgcggtgctgcaagtagtagcactggagtctgcgcctgttgcgacattg
ggggcgttgttggaagtgcatccggcattccccaagcgagtcaatgttggtttcatgcag
gtcgtcgggcgggatgccatccgcttgcgggtgtttgagcgcggttgtggcgaaacgttg
gcgtgtggtacgggtgcttgcgccgcagtggtggctgggcgcttacaaggtctgctggat
gatcaggtgacagtaagcttgcccggcggcgatttacagattcagtggcaaggcgaaggg
cagccggtatggatgatcggcccggcagcaacggtattcaggggaacactcatcgtatga

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