Thiothrix lacustris: RCF98_10200
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Entry
RCF98_10200 CDS
T09396
Symbol
dcm
Name
(GenBank) DNA (cytosine-5-)-methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
tlc
Thiothrix lacustris
Pathway
tlc00270
Cysteine and methionine metabolism
tlc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RCF98_10200 (dcm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tlc03000
]
RCF98_10200 (dcm)
03032 DNA replication proteins [BR:
tlc03032
]
RCF98_10200 (dcm)
03036 Chromosome and associated proteins [BR:
tlc03036
]
RCF98_10200 (dcm)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
tlc02048
]
RCF98_10200 (dcm)
Enzymes [BR:
tlc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
RCF98_10200 (dcm)
Transcription factors [BR:
tlc03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
RCF98_10200 (dcm)
DNA replication proteins [BR:
tlc03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
RCF98_10200 (dcm)
Chromosome and associated proteins [BR:
tlc03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
RCF98_10200 (dcm)
Prokaryotic defense system [BR:
tlc02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
RCF98_10200 (dcm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
WML89342
LinkDB
All DBs
Position
2093869..2094936
Genome browser
AA seq
355 aa
AA seq
DB search
MTQALNHETRAYTGIVLERIKHLPPGGKMGDLPPHLQHESFVRTGAKKTGGPNMRLLRLE
HDKPALTVTAYIFNKFVHPQEDRYLTPREAASLQDFPVDYAFMGTQGQVHQQIGNAVPVK
LGKAIATEVANYFVKQGQTGVIKIASYFCGAGGLDLGFEQASTDTIQFKTCFSTDIEEPV
EKTIRKNRSEWNFQRADIRALDPEQVSQGMGCNPDVIIGGPPCQPFSVAGKQKAIHDPLG
VLYRDYIQHIDYLKPKMVVMENVYGLAQVKAANMVAEIYQSFADIGYAVTHCELMAADYG
TPQKRRRLFFVAARDLDGFRFPEPTHSEYENLLGLPRYVGAGEILATLPPARLKP
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaagctctgaaccacgaaacccgcgcttacactggtatcgtgcttgagcgtatc
aagcatttgcccccaggcggaaagatgggtgatttgccgccccatttacagcatgaaagc
tttgtacgcacaggcgcaaagaaaacaggtggcccgaacatgcgcttgttgcgtttggag
catgacaaacccgcgttaacggtgacggcctatatcttcaataagtttgtccatccacag
gaagaccgctatttgacgccacgtgaagccgctagtcttcaggattttccagtggattac
gccttcatggggacacaggggcaagtccatcagcaaattggtaatgccgtccccgtcaaa
ttgggtaaagcgattgcgacggaagttgccaactattttgtcaaacaaggtcaaacaggt
gtaatcaaaatagcatcctacttttgtggggctggtggtctggatttgggctttgaacaa
gccagcactgacacgatccagttcaagacttgtttttcgaccgacatagaagagccagta
gaaaagactatccgtaaaaacaggtcagaatggaattttcagcgtgccgatattcgggcg
ttagaccctgagcaggtcagtcagggaatgggatgtaaccccgatgtcattattggtggc
ccaccgtgccagccgttcagcgtggcgggtaagcaaaaggctatccatgatccgctaggc
gttttgtaccgcgactatatccagcacattgattacctgaaacccaaaatggtggtaatg
gaaaatgtgtatgggcttgcccaagtgaaagccgcgaatatggtggcagaaatctaccag
tcatttgccgatattggctatgcagtgacccactgtgaattgatggcagccgattacggt
acaccgcagaaacggcggcggctgttcttcgtggctgcgcgtgatctggacggtttccga
ttcccggagccaacacacagtgagtatgaaaacttattagggctgccacgttacgtggga
gctggtgaaatattggcaacattaccacctgccagactcaagccgtaa
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