Thiothrix lacustris: RCF98_10745
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Entry
RCF98_10745 CDS
T09396
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tlc03009
]
RCF98_10745 (rimO)
Enzymes [BR:
tlc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RCF98_10745 (rimO)
Ribosome biogenesis [BR:
tlc03009
]
Prokaryotic type
ribosomal protein modification factors
RCF98_10745 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
DUF5005
Motif
Other DBs
NCBI-ProteinID:
WML89449
LinkDB
All DBs
Position
2204427..2205737
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AA seq
436 aa
AA seq
DB search
MKQAQPRVGFVSLGCPKALVDSERILTQLRAEGYEISGSYDDADLVVVNTCGFIDSAVEE
SLDAIGEALHENGKVIVTGCLGANADKVLDAYPNVLAVSGPHAYEAVMQSVHAHLPPLHD
PYMHLIPPQGVRLTPRHYAYLKISEGCNHRCSFCIIPSLRGDLVSRPIGDVLQEAENLVN
AGVRELLVISQDTSAYGIDVKYRTGFWQGRPIKTHSQQLAEALGDMGVWVRLHYVYPYPH
VDNLIPLMAEGKILPYLDIPFQHASPSVLKAMRRPAHAEKVLDRLKNWRETCPDIAVRST
FIVGFPGETEDDFEMLLDFLQEAQLDRVGAFTYSAVDGAPANAIDGAVPEEVKEERLERF
MEVQAEISAAKLSRLIGKTMTVLVDEAGDGQSIARSHRDAPEIDGQVIIEGVELPVGEFA
QVRITHADEHDLWGEI
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaagctcagccccgtgtcggtttcgttagtctcggttgccccaaagcattggta
gattccgaacgtatccttacccaattacgtgccgaaggttatgaaatcagcggcagttac
gatgatgccgatctggtggtagtgaatacctgcggtttcattgattcggcggtggaagag
tcgctggatgcgattggcgaagctttgcatgaaaatggcaaggtgatcgtcactggctgt
ctgggggcaaacgccgacaaggtgctggatgcttaccctaacgtgctggcggtcagtggc
ccccatgcttatgaagcggtcatgcaatcggtacacgcgcatctgccgccgctgcatgac
ccgtatatgcacttgatcccgccacagggtgtgcgcctgacgccgcgccattacgcttac
ctgaagatttcggaaggttgtaaccaccgttgttccttctgcattatcccgtcattgcgg
ggtgatctggtatcgcgcccgatcggtgatgtgttgcaggaagctgaaaatctggtgaat
gccggtgtcagagaattgctggtgatttcacaagataccagtgcttatggcattgacgtg
aaataccgtactggtttctggcaaggccgcccgatcaaaacccattcccagcaattggcg
gaagccttgggcgacatgggtgtatgggtgcgtctgcattatgtttacccttacccgcac
gttgataacctgattccgttgatggcggaaggcaaaattttgccgtatctggatattcct
ttccaacacgccagcccttcggtgctgaaggcgatgcgtcgcccggctcatgcagagaaa
gtcttggatcgtttgaaaaactggcgtgaaacctgcccggatatcgcggtgcgcagtacc
ttcattgtgggtttccccggtgaaaccgaggacgactttgagatgctgttggactttttg
caggaagcgcaacttgaccgagtgggcgcctttacgtactcagcagtggatggtgcgccc
gccaatgctatcgacggcgctgttcctgaggaagtcaaagaggagcgtttagagcgcttt
atggaagtacaggcggagatcagtgcggcaaagcttagtcgtttgatcggtaaaaccatg
actgtactggtggatgaagctggtgatggacaaagtattgctcgcagccatcgtgatgcg
cctgaaattgatgggcaggttattattgaaggcgtggagttacccgttggagagtttgcc
caagtgcgcattactcatgctgatgaacatgatctctggggggaaatttaa
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