Thiothrix lacustris: RCF98_10755
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Entry
RCF98_10755 CDS
T09396
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tlc01011
]
RCF98_10755
Enzymes [BR:
tlc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RCF98_10755
Peptidoglycan biosynthesis and degradation proteins [BR:
tlc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RCF98_10755
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
DUF3450
PBP5_C
Motif
Other DBs
NCBI-ProteinID:
WML89451
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Position
2207993..2208799
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AA seq
268 aa
AA seq
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MKIVKHNILSGWTRPVGIGITALALAVTFSLPTSVAAKEKKSASKVTVSKKSNKRVSKKT
SKSKVLIKNIKKSDKVGKSTQTSATKTTKVTKTSQSKIASKKHSKSAVKRVSYQPKQHSS
SLAWNPSTDSKQAYYVMPTAFEGAVGKPQQPPKYLQPSTDSVQKSAESDKVHQVGTASYY
SDKFDGRKTASGERFDQDDLTCAHGSLPFGCRIRVTNLRNNKAVEVKVNDRGGFSKQGGR
VVDLSKAAAKEIGMMGTGTAKVKVEVLQ
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagtaaagcataatatattatcaggttggactcggcctgtcggcattggcata
acggctttggctcttgccgtcacgttcagcttaccaacatccgttgcagcgaaagagaaa
aaatccgctagtaaggtgacagtaagtaagaaaagcaataaaagagtcagcaaaaaaacc
agcaagtctaaagttttgataaaaaatataaaaaagtcagataaagttggaaaatccact
caaacatcagcgactaaaacaactaaggtaaccaagacaagtcaaagtaagattgccagt
aaaaagcacagtaaatctgccgtcaagcgtgttagctaccaaccaaagcaacattcatcc
tcgttagcgtggaatccatccactgactccaagcaagcttattatgtgatgccaaccgca
tttgagggcgctgtgggcaagccgcaacagccacctaaatacctgcaaccttctacggat
tctgttcaaaaatccgctgaatccgacaaagtgcatcaggtgggtacagcctcttattac
agtgataaattcgacggtcgtaaaaccgccagtggcgagcgttttgaccaagatgatctt
acctgtgcgcatggtagtttaccgtttggttgccgtattcgcgtcaccaacctgcgtaac
aacaaggcagtggaagttaaagtcaatgatcgcggtggtttcagtaaacagggtggtcgg
gtcgtcgatctatccaaagcagcggccaaagaaattggcatgatgggaaccggcactgcc
aaggtgaaggttgaggtattgcaataa
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