Thiothrix lacustris: RCF98_10845
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Entry
RCF98_10845 CDS
T09396
Name
(GenBank) GntR family transcriptional regulator
KO
K24967
GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tlc03000
]
RCF98_10845
Transcription factors [BR:
tlc03000
]
Prokaryotic type
Helix-turn-helix
GntR family
RCF98_10845
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_36
HTH_Crp_2
HTH_11
HTH_50
HTH_DeoR
HTH_24
RP-C
Motif
Other DBs
NCBI-ProteinID:
WML89468
LinkDB
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Position
2228135..2228968
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AA seq
277 aa
AA seq
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MSAVSLVSPTFHLDVGLNAVNDSAAFIQRLKPDTGISEPVYRQLLRQIIQMIQSGELGDG
DSLPSERTLAEALSLSRTTIRRCYDELRGQDFISTHGRSGVIVKAPPRINPELGKLKGFT
EEMHELGMEPSTQLLERRVVSDRMIAAVFNRPSSARFLKLIRLRLGNGMPMTREVAWYDL
TLAPALVDWDVVGSAYQFLQQHCGVALADGEQTIEAVMSNAEEMDVFGFGEPGPCLLLKR
KTYATSGQMVEYVEGTFRGDAYTYRITLKMNPTTAQP
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagtttccttggtatcccctacttttcacttggatgttggtctgaatgcggtt
aatgacagtgctgcattcattcagcgactgaaaccggacacgggtatttctgagccagtc
tatcgacagttactgcggcaaattattcagatgatccagtctggggagttgggggatggc
gacagcttgccttccgagcgtaccttggcagaggcgctaagcttgagccgtaccactatt
cgccgttgttatgatgagttacgtgggcaggattttattagcactcatgggagatctggc
gttatcgtcaaagccccgccgcgcatcaacccggaattgggcaagctcaaggggtttacc
gaagaaatgcacgaactgggtatggagccatctacccagttactggaacgcagggttgtg
tcagatcgcatgattgcagcggtgttcaatcgcccctcctcggcgcgtttccttaaactg
attcgtttacgcttgggaaatggtatgcccatgacccgtgaggtggcgtggtatgacctg
acgcttgccccggcattggtggattgggatgtggtgggttctgcctaccaattcctgcaa
cagcattgtggcgtggccttggcagatggtgagcagaccattgaagccgtgatgagcaat
gccgaagaaatggatgtattcggctttggagaacctggcccgtgtttgctgctcaagcgt
aaaacctatgctaccagcgggcagatggtggaatacgtggagggcacatttcgtggtgat
gcctacacgtaccgtattactttgaagatgaatccaacgactgcccagccataa
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