Thiothrix lacustris: RCF98_11350
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Entry
RCF98_11350 CDS
T09396
Name
(GenBank) type II secretion system F family protein
KO
K02653
type IV pilus assembly protein PilC
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tlc02044
]
RCF98_11350
02035 Bacterial motility proteins [BR:
tlc02035
]
RCF98_11350
Secretion system [BR:
tlc02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
RCF98_11350
Bacterial motility proteins [BR:
tlc02035
]
Pilus system
Pilus assembly proteins
RCF98_11350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
RecX_HTH2
Motif
Other DBs
NCBI-ProteinID:
WML89566
LinkDB
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Position
2332065..2333312
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AA seq
415 aa
AA seq
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MQSKTLKKSTQAKASPSASQAVYSWEGVNRNGVKMRGETQAVNPNWLRAELRRKGINPGR
IYKKARPLFKPAIKPADIAQFARQLTTMMRSGVPMVQSLELMASGGDNVSVRDLIKKLTA
DIEGGASLGSALARHPKYFDKLFVNLVKAGEQAGTLETMLEKVASYKEKSEALKAKVKSA
MTYPIIVVVAAVVVSAILLIWVIPQFKEVFSSFGADLPAFTLLVISFSDWLVANWWMPIL
VFVAIGFSFTQARQRSPAFDRFVDKASLKIPIMGNILNLSAVARFARTLATMFAAGVPLV
EAMDSVAGATGNALYEEASRRIQDDTARGVQLNTAMMTTQLFPNMMVQMTRIGEESGRLE
EMLAKVADYYEAQVDALVDTLAKQIEPLIMAVLGGIVGSLVIAMYLPIFKLGSVV
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcaaaaccttgaaaaaatcaacacaggcgaaagcatcgcccagtgcatcccaa
gctgtttacagctgggaaggcgtcaaccgtaatggtgtgaagatgcgtggggaaacccaa
gcggttaaccccaactggttacgtgctgaactgcggcgcaaaggtattaatccagggcgt
atctataaaaaagcgagacccctgttcaagcctgctattaaaccagcagatattgcccag
tttgcccgccagctgacgaccatgatgcgctcaggtgttccaatggtgcagtcacttgag
ctgatggcatcaggcggggataatgtgtcggtgcgtgacttaatcaagaaattgacggcg
gatattgagggaggggctagcctcggtagtgccttagcacgccatcccaaatatttcgat
aagttattcgtcaatctcgttaaggctggtgagcaagcgggtacgttggaaacgatgctt
gaaaaagtagccagttataaagaaaaaagtgaagcgctcaaagctaaggtcaaaagtgcg
atgacctacccgattatcgttgttgttgccgcagtggtggtgtcggccatcctgttaatc
tgggttattccgcagtttaaggaagtgtttagcagttttggcgcggacttgcctgccttt
accttattggtgatttccttttcagactggttagtcgctaattggtggatgccaattttg
gtctttgttgccatcggatttagctttactcaggcaaggcagcgttctcctgccttcgat
cgttttgtggataaagcctcgttaaagataccgatcatgggtaatatcctgaatctgtcg
gctgttgcccgttttgctcgcacacttgccaccatgtttgctgctggtgtccccttggtc
gaggcgatggattccgtagcaggcgcaaccggtaatgcgctgtatgaggaggcttcgcgt
cgcattcaggacgatacggcacgcggtgtacagctcaataccgcgatgatgaccacacaa
ttattccctaatatgatggtacaaatgactcgtatcggtgaagaatctgggcgactggaa
gaaatgctggcgaaagtcgccgattattacgaagcacaggtagacgccttggtggatacc
cttgctaaacaaattgaaccgctgatcatggcggtattgggtggtatcgtcggtagtttg
gttattgccatgtacttgcccatctttaaacttggatcagtcgtttag
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