Thiothrix lacustris: RCF98_11435
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Entry
RCF98_11435 CDS
T09396
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K10021
octopine/nopaline transport system ATP-binding protein [EC:
7.4.2.1
]
Organism
tlc
Thiothrix lacustris
Pathway
tlc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RCF98_11435
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tlc02000
]
RCF98_11435
Enzymes [BR:
tlc01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.1 ABC-type polar-amino-acid transporter
RCF98_11435
Transporters [BR:
tlc02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Octopine/nopaline transporter
RCF98_11435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_16
AAA_13
RsgA_GTPase
G-alpha
NACHT
AAA_23
AAA_22
ATPase_2
Viral_helicase1
NB-ARC
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
WML89581
LinkDB
All DBs
Position
complement(2348450..2349223)
Genome browser
AA seq
257 aa
AA seq
DB search
MPPEHALVVNNIKKRFGDLAVLNGISLTAHKGDVISLLGSSGSGKSTLLRCINLLETPDE
GEVYVTGERIEMTHDRHGKTIPKSQKQVDHIRTRLGMVFQGFNLWSHRTILDNIIEAPVH
VLGIPKAEAKEYALELLHKVGIASKADSYPDHLSGGQQQRVAIARALAMKPAVMLFDEPT
SALDPELVGEVLRVMRQLADEGMTMLVVTHEMGFAREVSSQVIFLHQGQIEEQGSPEQVF
GNPISERCQQFLASQLK
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcccccggaacatgccctcgtcgtcaacaacatcaaaaaacgcttcggtgatttagcc
gtcctcaatggtatctcgctgaccgcacacaagggcgatgtcatctccctgctgggttct
agcggttctggcaagagcaccctactccgttgcatcaacttgctggaaaccccggatgaa
ggcgaggtttacgtcacgggcgaacgcattgaaatgacccatgaccgccacggcaaaacc
attcccaaaagccagaagcaggttgaccacatccgcacccgtttgggcatggtgttccaa
ggcttcaacttgtggagccaccgcaccattctggacaatattatcgaagcgccggtgcat
gttctcggcatccccaaagccgaagccaaggaatacgcactggaattgctgcataaggtt
ggcattgccagcaaagccgacagttaccccgatcacttgtccggtgggcagcaacagcgc
gttgccattgcccgcgctctagcgatgaaacccgccgtgatgctgtttgacgaacccact
tccgccctcgacccggaattggtgggcgaagtgctgcgcgtgatgcgccaactggccgac
gaaggcatgaccatgttggtcgtcacccacgaaatgggttttgcgcgggaagtctcctca
caagtcatctttttgcaccaagggcaaatcgaggagcaaggtagccccgaacaagtattc
ggcaacccgatatccgaacgctgccagcaattcctcgccagccagcttaaataa
DBGET
integrated database retrieval system
