Thiothrix lacustris: RCF98_12825
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Entry
RCF98_12825 CDS
T09396
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tlc03110
]
RCF98_12825 (clpB)
Chaperones and folding catalysts [BR:
tlc03110
]
Heat shock proteins
HSP100
RCF98_12825 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
ATPase_2
bpMoxR
IstB_IS21
nSTAND3
AAA_24
AAA_14
DUF815
Mg_chelatase
AAA_7
TniB
TsaE
AAA_28
RsgA_GTPase
NACHT
NBD_SMAX1
DNA_pol3_delta2
T2SSE
DUF5798
Rep_4
TT1_Tal
AAA_23
Motif
Other DBs
NCBI-ProteinID:
WML89852
LinkDB
All DBs
Position
2610614..2613223
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AA seq
869 aa
AA seq
DB search
MRMDKLTSKFQLALQDAQSLALGHDHQFIEPAHLMIALLDQEGGSTRGLLTKADVNVNQL
RSKLGEALDRMSSVSGGDAGSVHVSNDLSKLLNITDKIAQQRKDQYISSELFILAGLEDK
GTLGNLLRETGATKGAVDKAIEGMRGGQTVNDPNAEEQRQALEKYTIDLTERAEQGKIDP
IIGRDEEIRRMVQILQRRTKNNPVLIGEPGVGKTALVEGLAQRIVNGEVSEGMKGKRLLS
LDLGALLAGTKYRGDFEERLKAVLNDIAKAEGNVILFIDELHTMVGAGKADGAMDAGNML
KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVQEPTVEDTIAILRGLQEKYEV
HHGVDITDPALVAAATLSHRYITDRQLPDKAIDLIDEAASRIRVEIDSKPEVMDKLERRL
IQLKIEREALKKESDDASKKRLADLQAEIDRLEGEFSDLEEIWKGEKAALQGTTHIKEAL
DQARLEMDTARRAGNLQRMAELQYGKIPELEQQLEKADASIAGSGSQETKLLKNKVTEEE
IADIVSRWTGIPVSKMLEGEKDKLLHMEDALSKRVIGQREAVVAVSNAIRRARAGLSDPN
RPSGSFLFLGPTGVGKTELTKALATFLFDTDEAMVRIDMSEFMEKHSVARLIGAPPGYVG
YEEGGYLTEAVRRRPYSVILLDEVEKAHSDVFNVLLQVLDDGRLTDGQGRTVDFRNTVII
MTSNLGSHIIQELSGEDNYDQMKAAVMEVVGTHFRPEFINRIDETVVFHPLDQAEIRQIA
DIQLNNLRKRLVARDLGIQISDAALDLLAEAGFDPVYGARPLKRAIQQQVENPLAQQILS
SRFMPGDTIMVGVEEGRLTFTALVEATEA
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgagaatggacaaactcaccagcaaattccaactcgccctgcaagacgcgcaatcgctt
gcgctggggcatgatcaccagtttatcgaacctgcgcacttgatgattgccttgctggat
caggaaggcggttccacacgtggcttgctcaccaaagccgatgtcaacgtcaaccagctc
cgctccaaactcggcgaagcgcttgaccgtatgtctagcgtttccggtggcgatgcaggc
agcgtgcacgtttccaacgatctcagcaaattgctgaatatcaccgacaaaatcgcccag
caacgcaaagaccagtacatttcttcagaactcttcattctcgccggactggaagacaaa
ggcacactcggcaatttgttgcgtgaaaccggcgcgaccaaaggggcagtggacaaagcc
atcgaaggaatgcgcggcggtcaaaccgtcaacgaccccaacgccgaagagcaacgtcag
gcgctggaaaaatacaccattgacctcaccgaacgcgccgaacagggcaagatcgacccg
atcattgggcgtgacgaagaaatccgccgaatggtgcaaatcctgcaacgccgtaccaaa
aacaaccccgtcctcatcggcgaaccgggcgtgggcaaaaccgcgctggtcgaaggtttg
gcgcaacgcatcgtcaacggcgaagtttccgaaggcatgaaaggcaaacgcctgctctcc
ctcgacctcggcgcactgctggcaggcacgaaataccggggtgactttgaagaacgcctc
aaagccgtgctcaacgacatcgccaaagccgaaggcaatgtcatcctgttcatcgacgaa
ctgcacacgatggtcggtgcaggcaaggccgatggtgcgatggacgctggtaatatgctc
aagcccgccctcgcacgcggcgaattgcactgcgtcggcgcaaccacgctcgacgaatac
cgccaatacatcgaaaaggatgccgccctcgaacgccgcttccaaaaagtgctggtgcaa
gagccaacggtggaagacaccatcgccatcttgcgtggccttcaagaaaagtacgaagtg
caccacggcgtcgacatcaccgaccccgcgttggtcgctgccgccacgctgtcacaccgt
tacatcaccgaccgccaattgccggacaaggccatcgacctgatcgacgaagctgcttca
cgcatccgcgtcgaaatcgactccaagcctgaagtgatggacaagctcgaacgccgcctg
atccagctcaagatcgaacgcgaagccttgaaaaaggaaagcgatgacgcctccaaaaag
cgtttggctgacttgcaggccgaaatcgaccgactggaaggcgagttttccgacctcgaa
gaaatctggaaaggcgaaaaagccgccctgcaaggcacgacccatatcaaggaggcgctc
gaccaagcgcgtctggaaatggacaccgcccgccgcgcaggcaacctgcaacgcatggcc
gaactgcaatacggcaaaattcccgaactcgaacagcaactggaaaaagctgatgccagc
attgcaggctcaggctcacaagaaaccaagttgctgaaaaacaaggtgacggaagaagaa
attgccgacatcgtgtcgcgttggacaggcattcccgtcagcaaaatgctcgaaggtgaa
aaggacaaactgctgcacatggaagacgccctcagcaagcgcgtcatcgggcagcgcgaa
gcggtggtggcggtttccaacgccatccgccgggcgcgtgccgggctttccgaccccaac
cgccccagcggttcgttcctgttccttggcccgacaggtgtgggcaagaccgaactcacc
aaagcgttggcgactttcctgttcgacaccgacgaggcgatggtgcggattgatatgtcc
gaattcatggaaaagcattccgtggcacgcctgattggtgcgcctcccggctatgttggt
tatgaggaaggcggctatttgaccgaagccgtgcgtcgtcgcccgtattccgtgatcctt
ctggatgaggtggaaaaagcccacagcgatgtgtttaatgtgctgctgcaagtgctggac
gacgggcgtttgaccgacgggcaaggccgcacggtggacttccgcaataccgtgatcatc
atgacctcgaacctcggttcgcacatcattcaggaactgtcgggcgaggataactacgac
cagatgaaagcagcggtgatggaagtcgtcggcacgcatttccgccccgaattcatcaac
cgtatcgacgaaaccgtggtattccacccactggatcaggctgaaattcgccagattgcc
gatattcagctcaacaacctgcgcaagcgcttggtggcgcgtgatttgggcatccagatc
agcgacgcggcactcgacttactggcagaagcgggttttgaccctgtgtatggcgcacgc
ccactcaaacgcgccatccagcaacaggttgaaaacccgttggcacagcaaatcctcagc
agcaggttcatgccgggagatacgattatggtgggagtggaagagggtaggttgacgttt
acggcgttggttgaggctactgaagcctaa
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