Thiothrix lacustris: RCF98_12910
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Entry
RCF98_12910 CDS
T09396
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
tlc
Thiothrix lacustris
Pathway
tlc00470
D-Amino acid metabolism
tlc00550
Peptidoglycan biosynthesis
tlc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RCF98_12910 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RCF98_12910 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tlc01011
]
RCF98_12910 (murD)
Enzymes [BR:
tlc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RCF98_12910 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
tlc01011
]
Precursor biosynthesis
Amino acid ligase
RCF98_12910 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
TrkA_N
2-Hacid_dh_C
FAD_binding_3
Shikimate_DH
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
WML89867
UniProt:
A0ABY9MMR9
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All DBs
Position
2627516..2628865
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AA seq
449 aa
AA seq
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MTTQIHNWETLVVGLGQTGLSVARHLHAQGVAFAVVDSRANPPGKDELFVQFPDIPYFFG
AFAEVSQWFTAAATLVVSPGIAIATPEIRAAGERGASLIGDIELFVREAKAPVIAISGSN
GKSSVTTLVDLMAKKAGMVSYAGGNLGYSALDLLEKPTPDLYVMELSSFQLETTQSLKAV
ASVVLNVSEDHMDRYPSFVDYAAAKQVVYQHCGCAVVNRDDTVVINLADNAVYGSRISFG
LDEPAAGQYGIRNHAGKRWLAKGETLLLAVDEMKLPGDHNYANALAALALGEAAGIPLEG
MLAALREFTGLSHRTQWVRERHGVNWYNDSKGTNVGATLAALAGLPGKTVLIAGGQGKGA
DFAPLRWVAADKARALVLIGEDRDKLAAVVEGYAPYVFAHDMAEAVLNAAELAQAGDNVL
LSPACASFDMFKSYVHRGEVFSDAVRSLP
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgcaaatacacaattgggaaacgttggtggttggccttggtcagaccggcttg
tcggttgcacgtcatttgcacgcacagggcgtggcttttgctgtggtggatagtcgtgca
aatccacccggtaaggatgagttattcgttcaattccctgatataccttacttctttggt
gcatttgcagaagtctcgcagtggtttacggcggcggctactttggtggttagccccggt
attgcgattgctacccctgagattcgcgcggcgggtgagcgcggtgcgtcactcattggc
gatatcgagttatttgtgcgtgaagccaaagcgcctgtgattgcgattagtggttccaac
ggcaaaagtagcgtgacgacgttggtggatctgatggcgaaaaaagccggtatggtttcg
tatgctggcggaaatcttgggtattcagcgttggatttgctggagaaacccaccccagat
ttatatgtgatggagctttctagctttcagttagaaacaactcagtctttgaaggcagtt
gcttcggtcgttttaaacgtcagcgaagaccacatggatcgataccccagcttcgtcgat
tatgccgcagcaaagcaagtggtgtaccagcattgtggatgtgcggtggtaaatcgtgac
gatacggtggttattaatttagcggataatgctgtttatggcagtagaatcagttttggt
cttgatgagcctgctgctggtcagtacggcatccgtaaccatgcgggtaaacgttggttg
gcaaagggtgaaaccttgctgctggctgttgatgagatgaaattgccaggcgatcataac
tatgcgaatgcactggcagcgctggcattgggcgaggctgctggtattcctcttgagggg
atgttggcggcgttacgtgagttcacggggctgtcgcaccgtacccagtgggtgcgtgaa
cgccatggggtgaattggtataacgattccaaagggacaaatgtaggggcaacgttggct
gctttggcggggctacccggcaaaacggtgttgattgcaggcggtcaaggtaagggtgct
gattttgcaccgttgcgttgggtggcggctgacaaggcacgggcgctggtgttgatcggt
gaagaccgtgacaagctggcagcagtggtggaaggttatgcaccttacgtgttcgctcat
gatatggcggaggcagtgttgaatgctgcagaactggctcaagccggtgataatgtgttg
ctttcccctgcgtgtgccagttttgatatgtttaaaagctatgttcaccgtggtgaggtg
ttcagtgatgcggtgaggagcttgccatga
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