Thiothrix lacustris: RCF98_13310
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Entry
RCF98_13310 CDS
T09396
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
tlc
Thiothrix lacustris
Pathway
tlc00500
Starch and sucrose metabolism
tlc01100
Metabolic pathways
tlc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RCF98_13310 (glgX)
Enzymes [BR:
tlc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
RCF98_13310 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
ISOA1-3_C
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
WML89943
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All DBs
Position
2721647..2723812
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AA seq
721 aa
AA seq
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MSSNDLSSQAASPLVFFTPCPHPYGCQPEHNMTHSSYPVEPGNRSQGGTTITEDGVNFCV
FSRHAERLELLLFERDDSTEPFQIIELDPDTHRTFFFWHVLVLGLPMGTWYNWRAHGQGE
TRTTGRRFDSEKALLDPWATTISDRLWNREAASLPGDNVAQAMRAMVQSDAYDWEGDTPL
HIPLSESVIYEMHVGGFTRHPSSGVEHPGSYAGVIEKIPYLQALGVTHVELLPVMAFDRQ
DLPPKTASMGLSNYWGYSTHSFYAPHPHFAVEAARARDEFRDMVKALHRAGMGVILDVVF
NHTAEGSPFGPTINFKGLGNEMFYHLDFIDRSRYRDYSGCGNTVNCNHPMVSRFLVDALR
YWVEEMHVDGFRFDLASAMARGEDGNPQYHAPMLWHIELSQFLSQTHIIAEAWDAAGLYQ
LGDFPGFRWAEWNGLYRDVIRAFVRGDTGLVPEVATRMCGSSDLYASRGRLPWNSINFVT
CHDGYTLWDLVSFEGKHNAANGEDNRDGHNHNLSANYGVEGASDDPRIDRLRRRQAKNLV
AILLLSQGVPMLHGSDEILATKQGNNNTYCQDNALSWQDWNLVERNADMLAFVQGMIRLR
RRHPTLSRSRFVTGQPRNGHDLPDITWHGTALNAAPWNDPDARHIAFTLAGSKPDEPALH
IVLNMAEEAQTFALPPFPGRQWRLAVDTTTAPGVYEPAEQPIISANQLTVEGRCVVVLES
H
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcaatgatctttcctcacaagccgcctcgcctctggtattctttacgccatgt
ccacacccctatggctgtcagccggagcataacatgacgcattcgagttaccctgtcgaa
cctggaaatcggagccaaggcggcactaccatcaccgaagacggcgtgaatttctgcgtt
ttctcccggcacgcggagcgtctggaattgctgttgttcgagcgcgatgacagcacagaa
cctttccagattatcgaactggatccagatacgcaccgcacctttttcttttggcacgta
ttggtgctgggcttgccgatgggaacttggtacaactggcgtgcccacgggcagggcgaa
acccgcaccaccggtcgccgctttgatagtgaaaaagccttgctagacccgtgggcgacc
acgatcagtgaccggctgtggaatcgcgaggccgcttctcttcccggcgataatgtcgcc
caagcgatgcgggcgatggtgcagagtgatgcttacgattgggaaggtgataccccgtta
cacattccgttgagcgagtcggttatctatgagatgcacgtggggggctttacccggcat
ccttcctccggggtcgagcatcccggtagttatgctggcgtcatcgagaaaattccctac
ttacaggcactgggtgttacccacgtggagctgctgccggtgatggcgttcgaccgtcag
gatttaccgcccaaaacggcgtcgatggggttaagcaattactggggttacagcacgcac
agcttctatgcaccgcatccgcattttgcggtggaagcggcgcgtgcccgcgatgagttc
cgcgatatggtcaaggcattgcaccgcgcaggcatgggcgtgattctcgatgtggtcttc
aatcacaccgccgagggcagcccgtttggccctaccatcaatttcaagggactcggcaac
gagatgttttaccacttggacttcatcgaccggagccgctatcgggattacagcggctgc
ggcaataccgtgaactgcaatcacccgatggtgagccgctttctggtggatgccttgcgc
tattgggtggaagagatgcatgtggatggcttccgcttcgatctggcgagtgcgatggcg
cggggtgaggatggcaacccccagtaccatgcgccgatgctctggcatattgagctatcc
cagtttttgagccaaacccatatcatcgccgaagcatgggatgctgccgggctttaccag
ttgggggatttccccggtttccgctgggctgaatggaatggcctgtaccgggatgtgatc
cgcgcttttgtgcgtggtgacaccggactggttcccgaagtcgctacccgtatgtgtggc
tccagcgatttgtatgcttcccgtggacgcttgccgtggaactcgatcaactttgtcacc
tgccacgacggttacaccctgtgggatctagtcagttttgaaggcaagcacaacgccgcc
aatggtgaagacaaccgcgacggtcataatcacaacttgagcgccaactacggtgtggaa
ggggctagcgatgacccgcgtatcgaccggctgcgtcgtcgtcaggcgaaaaaccttgtc
gccattttgctgcttagtcagggcgtgccgatgctgcatggcagcgacgagatactggct
accaaacagggcaacaacaacacctattgccaagataatgccttgtcttggcaagactgg
aatctggtggaacgcaacgccgacatgctggctttcgtgcagggcatgatccggctacgg
cgtcgccacccaaccttaagccgctcgcgttttgttaccggtcagcccagaaatggtcat
gacctgcccgacattacttggcatggaacggcactcaatgcagcaccgtggaacgacccg
gatgcccggcacattgcgttcacccttgctggtagcaagcccgatgagccagcgctgcac
atcgtgctgaatatggcggaggaagcgcagacgtttgcattgccaccgttccccggtcgg
cagtggcgactcgctgtcgataccaccaccgcaccgggggtttatgaacccgctgaacaa
cccatcatcagtgcgaaccagctcacagtggagggacgctgtgtggtggtgctggagtcc
cactga
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