Thiothrix lacustris: RCF98_13610
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Entry
RCF98_13610 CDS
T09396
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tlc03016
]
RCF98_13610 (truB)
Enzymes [BR:
tlc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RCF98_13610 (truB)
Transfer RNA biogenesis [BR:
tlc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RCF98_13610 (truB)
Prokaryotic type
RCF98_13610 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
WML90001
UniProt:
A0ABY9MQA0
LinkDB
All DBs
Position
2777958..2778890
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AA seq
310 aa
AA seq
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MSRRRFRKLNGILLLDKGLGASSNKVLQDARFLFQAEKAGHTGSLDPLASGMLPVCFGEA
TKVSAFLLDSDKRYITTATLGYVSTTGDAEGERVNPRPIPDVSEADLEAVLAQFRGDISQ
IPPMYSALKKDGQPLYKLARQGLEVERPARDITIHSLQVLARTDDTLTLDVVCSKGTYIR
TLVEDIGEKLGCGAYVSMLRRESVEPFSTFRMYTLEELRALAEQGFDALDKVLLPLDVAL
PHLPAITVEDAVITRLRQGQKVRTDDTDAELLRLYSEFGEFIGLGECIRGVIIPRRLLAY
ESLTTPCADT
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
ttgagtcgccgccgcttccgcaaactcaacggtattttgctgctggataaaggcttaggc
gcatccagcaacaaagtcttgcaggatgcacgcttcctgtttcaggccgaaaaagccggg
cataccggcagtcttgatccccttgcgtctggcatgttacctgtttgttttggcgaagcc
accaaggtttccgcctttctgcttgattccgataagcgttatatcaccacggcgacactg
gggtatgtgagtactacaggcgatgcagaaggcgaaagagtcaatccacgccctatccct
gatgtctctgaggctgatctggaagccgtactggcacaattccggggcgacattagccag
attccaccgatgtattccgcactgaaaaaagacggacagccgctgtacaagttggcacgt
caaggtttggaagtggaacgtcctgctcgtgacattaccatccactccctgcaagtgttg
gctcgtaccgacgacacccttacgctggatgtggtgtgcagcaaaggcacgtatatccgc
acgctagtggaagacattggcgaaaagctcggctgtggcgcgtatgtttccatgctacgg
cgcgagtcggttgagccattcagcacattccgcatgtacacgctggaagagctgcgggca
ttggcggaacaaggtttcgatgctttggataaagtattgctgccattggatgttgcctta
ccacacctgcccgctatcaccgtagaagatgctgtcatcacccgcctgcgccaaggccaa
aaagtgcgtaccgatgatacggatgccgaattgctacgtttgtacagtgaattcggcgaa
ttcatcgggctgggtgagtgcatccggggcgttatcattccccggcgcttgctggcgtat
gaaagtcttacaaccccatgtgcagatacttga
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