Thiothrix lacustris: RCF98_13695
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Entry
RCF98_13695 CDS
T09396
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tlc02000
]
RCF98_13695
Transporters [BR:
tlc02000
]
Other transporters
Pores ion channels [TC:
1
]
RCF98_13695
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
BON
Yop-YscD_ppl_1st
Motif
Other DBs
NCBI-ProteinID:
WML90016
LinkDB
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Position
2798720..2799931
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AA seq
403 aa
AA seq
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MDKKSSCCCGALPAMWWWLLTLLGLPLLFLLMTGARQSVVEKDLTTRSEAALKAAGMDWA
QVKLTQRGRDVLLSGSAASDEERLAALKMVQGVNGVRDVQNMIEVAAAPAPEPAQAAVAA
EPVQAVASLDAPAPSKTPEFSLQSVGGKMVLQGVMGSQQEIDAALAAAQGVYGAGQVDNQ
LQLIEGVAPAAWLKDLAGLLPALQGLDNASLKVSAAGNSIGGQVPSDADKARVLDKARQL
LGGAIADDLAVAASKTPVPDSVTNAADPAQVAAEEKAVANCQQQLNDAMSGKTILFETNK
SAIKQDSAALLESLVGIISTCKEVVTERGIQISGHTDNVGNDAYNQRLSQQRADAVKNYF
IQKGVDGGLVKSVGFGESKPVAPNDNEADRSKNRRITFDINPE
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaaagctcgtgctgttgcggtgctctgcctgcaatgtggtggtggttgttg
accttactgggcttacctctgttgttcctgcttatgacaggagcacgtcagagtgtggtt
gagaaggatttaaccacccgcagtgaagcggcactcaaagccgctggtatggattgggcg
caggtaaaacttactcagcgtgggcgtgatgtgttgctcagtggtagtgcggcctctgat
gaggagcgtctggcggctttgaaaatggttcagggcgttaatggcgtgcgcgatgtgcag
aacatgatcgaggtggctgctgcgccagcacctgaacctgcacaagctgcggttgctgct
gaacctgtgcaagccgtggcttctcttgatgcgcctgctccctctaaaacacctgagttt
tccttacaatcggtgggtggcaaaatggtgctgcaaggggtgatggggtctcagcaagaa
attgatgcggcactggctgctgctcaaggtgtttatggcgctggtcaggtggataatcag
ttacagcttattgaaggtgttgcacctgctgcgtggttgaaggatttggcggggttgttg
cctgctttgcaaggcttggacaatgctagcctgaaagtgtcggcggcgggtaatagtatc
ggtgggcaagtgccttcggatgctgacaaagcgcgtgtgttggataaagctaggcaattg
ttaggtggtgctattgcggatgatttggccgttgcagcctctaaaacaccagtgcctgac
tcagtgaccaatgctgctgatccagcgcaggttgccgcagaagagaaagcggtcgcgaac
tgtcagcaacagttgaatgatgcgatgagcggtaaaaccattctgtttgaaaccaataaa
tccgctattaagcaagacagtgctgccttattggagtctttggttgggattatttctacc
tgtaaagaggtagttactgaacgaggcattcaaatcagtgggcatactgataatgttggt
aatgatgcttataaccagcgtttgagccagcaacgtgccgatgcggtgaagaattacttt
atccagaaaggggttgatggtggattagttaagagcgttggctttggcgaaagtaagcca
gtcgctcctaatgacaatgaagctgatcgctcaaaaaatcgccgaatcacctttgatatt
aaccctgagtaa
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