Thiothrix lacustris: RCF98_13745
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Entry
RCF98_13745 CDS
T09396
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K02005
HlyD family secretion protein
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
RCF98_13745
SSDB
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Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_CzcB
BSH_RND
Beta-barrel_AprE
BSH_CusB
Beta-barrel_YknX
YknX_C
BSH_YknX
HH_MFP_RND
CzcB_C
RND-MFP_C
Beta-barrel_RND
DUF7032
Biotin_lipoyl
OmpH
CALCOCO1
ATG14
CCDC39
TarH
Motif
Other DBs
NCBI-ProteinID:
WML90026
UniProt:
A0ABY9MN03
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Position
2808212..2809546
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AA seq
444 aa
AA seq
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MSNTVDSTTSSSVKAVLAAGGKKKRQGRSGKWLLTLLVAALVAGGAGYYFMGQSQTSHQA
SYKTTPAQTGNLSVTVTATGNLQPKNQVDIGTELSGTVDEVLVDANEVVKKGQKLASLNT
TQLQDTITKGKAALASAQAKVKQSAATIKEARTKLARLRELYNTSGGKLPAKSELDTAEA
TLERAQADEEVAKTTVTSAAADLRSAQTNLDKAIITSPIDGVVLTRTVESGQTVASSLSA
PTLFTLAEDLAQMEVEVGVDEADVGQVKAGQSAEFTVDAWPGRKYPAELTRVSLGSSISD
NVVSYITVLAVQNTDLTLRPGMTATATIKTDARENVLLVPNTALHFTPTVEAAPDAPAET
SFISKLMPRPPGMGGQKKRTSDSEKTVASVDGMQTLWVLENNAPTTIQVKVGITDGKMTE
IVSGDLKAGMQVITESTSGVGGAP
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacacagtcgattcaaccaccagcagttccgtcaaagcagtgctggcagccggt
ggtaaaaagaagcgtcagggtcgcagtggcaagtggctacttaccttactggtcgcggcg
ctggtcgcagggggcgcggggtattatttcatggggcaatcccaaaccagtcatcaggcc
agttacaagaccacgcccgctcaaacgggcaacctcagcgtgaccgttacggcaaccggc
aacctgcaacccaaaaatcaggtcgacatcggcacggagctttccggtacggtcgatgaa
gtcttggtggatgccaatgaagtggtgaaaaaaggccagaaactggcaagcctcaatacc
actcagttgcaagataccattaccaaaggcaaagcagcgctggcttctgcccaagccaag
gtcaagcaatcagccgccactatcaaggaggctcgtactaaactggcgcgtttgcgtgag
ctgtacaatacctcaggcggtaaattgcctgccaagtctgagctggatactgccgaagcc
acgctggaacgtgcccaagccgatgaagaagtggccaagacgacagtgacctccgctgcg
gctgatttgcgttccgcgcaaaccaatctggacaaagccatcatcacttcaccgattgac
ggggtagtgctgacccgcacggtcgaatcggggcaaacggtggcatcatcgctgtctgcg
cctaccttgtttaccttggcggaagacttggcacagatggaggtggaagtcggggtagat
gaagccgatgtcggtcaggtgaaagccgggcaatcagccgaattcaccgtggatgcttgg
ccggggcgcaaatacccggcagaactgacccgcgtcagtctcgggtcgagtatttctgac
aatgtggtttcctacatcaccgtgttggcagtgcaaaacaccgatttgaccttgcgcccc
ggcatgacggctacggcgaccattaagacggatgcgcgggaaaacgttttgctggttccc
aacacggcgctgcactttaccccgaccgtcgaagctgcacccgacgcacctgctgaaacc
agctttatttccaagctgatgccgcgtccgccgggtatgggggggcaaaagaaacgcacg
agtgacagtgaaaaaacggttgccagtgtcgatgggatgcaaaccctgtgggtattggaa
aacaatgccccgaccaccatccaagtcaaagtgggcattactgatggcaaaatgactgag
attgtcagcggtgacttgaaagcgggtatgcaggtcatcaccgaaagcacgagtggcgtg
ggtggtgcgccatga
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