Thiothrix lacustris: RCF98_13985
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Entry
RCF98_13985 CDS
T09396
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tlc03036
]
RCF98_13985 (smc)
Chromosome and associated proteins [BR:
tlc03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
RCF98_13985 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
SMC_hinge
AAA_29
BORCS7
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WML90072
LinkDB
All DBs
Position
complement(2855739..2859227)
Genome browser
AA seq
1162 aa
AA seq
DB search
MRLSKIRIAGFKSFVDLVTLDLRSNLTGILGPNGCGKSNTIDAVRWVMGESSAKHLRGAS
MEDVIFNGSSSRKPVGLASVELVFDNSDGTLGGEYANYAEISVKRQVSRDGDSRYFLNGS
KCRRRDITDIFLGTGLGPRSYAIIEQGMISRLIEAKPEELRNTLEEAAGISRYKERRRET
ETRMAHTRENLERLTDLRDELEKQLERLDKQAKAAQRFRELREEERHLEASVLVLQWAAL
KADGEQRLRDLSQRSTDYQEQIAQVRHLEASIEALRNQHSDANETLNTVQGEYYQAGADI
ARIEQSIQHQRDIQRRQQDALRSAEQSIEETQRHASEDRDKLSACEQALADLEPREEALG
EQLEMAEAHQQDAEDQLNDWQEHWHSIQQRIAEPTRHAQVEKARMEQLERQLSQTNQRFE
RLQQETGSLSTTRFLDDLQLLEAQQQEAAEAHLLATEQLADLSATLNEQQQAHRDVQAQL
DQARSQRQALQGRLASLETLQQAGLDKTDKARQQWLTAKGLDKAPRIAEQLRVASGWETA
VETVLGEGLDTICLDSLPIINDFPASGISLLENHASRPDTSPTMLASKIQYPTHASTLFA
GIRCAETLPEALSQRHSLAPNESIITRDGLWLGINWLRSPRQSDAHSGILQRQQEIESLR
EQLATLETSLADWQQRADSLRDSIRSHEQQRDQAQADTNRLHRTESEQRSRLLALQQRIE
QLHSRRQQIDADCAELDAQRMQQEEDHLLATEQRNAALALLETVQTERDRLAASREHLQH
AVNDARRTLRELQDEAQDIRLHLETNRTQRDNSQRQLERFTSRLELLEQQRDTLLEQMHL
QDDPAADLQAERDTALTQRAEVEQRLTQARQALQALEADIRQQDTARVQAERLVEQTRTE
QENRKLEWQAVQVREQTIAEQFAKTEFDAANLQATLPADARPEHFLQQLDSIQRSIQRLG
AINLAAIDEFREQSERKQYLDQQNDDLVAALETLDNAIRKIDRETRARFKETFDKVNSRL
QEMFPRLFGGGECYLEMTGDDLLTTGVAIMARPPGKRLSTIYLMSGGEKALTAVALVFAI
FELNPAPFCMLDEVDAPLDEANVGRFCELVRHMSEQVQFIFITHNKTTMELAENLIGVTM
REAGVSRLVAVDMAEAVKLANG
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtctaagtaaaatccgcattgccggattcaaaagtttcgtcgacctcgtgacgctg
gatttacgcagcaacctcaccggcatcctcggccccaatgggtgtggcaagtccaacacc
attgatgccgtgcgctgggtcatgggcgaatcctccgccaaacacttgcgcggagcgtcg
atggaggatgtcattttcaatggctcctcctcacgcaagccggttggcctagcctccgtc
gaactggtattcgacaacagcgacggcacactcggcggcgaatacgccaactacgccgaa
atctccgtcaaacgccaagtcagccgcgacggcgattcccgctatttcctcaacggctcg
aaatgccgtcgccgcgacattaccgacatcttcctcggcacaggcttaggcccccgcagc
tacgccattatcgaacaaggcatgatttcgcgcctgatcgaagccaaacccgaagaattg
cgcaataccctcgaagaagccgccgggatttcccgctacaaggaacgccgccgcgaaacc
gaaacccgcatggcgcatacccgcgaaaacctcgaacgcctcacggacttgcgcgacgaa
ctcgaaaagcaactcgaacgcctcgacaaacaagccaaagccgcgcaacgtttccgcgaa
ttacgcgaagaagaacgccacctcgaagccagcgtactcgtgctgcaatgggcggcactc
aaagccgacggcgaacagcgcctgcgcgaccttagccaacgttccaccgattatcaggaa
cagatagcccaagtccgccacctcgaagccagcatcgaagcacttcgcaaccagcacagc
gatgccaacgaaaccctcaacacggtacaaggcgagtattaccaagctggggcagacatt
gcccgcatcgaacaaagcatccagcaccaacgcgacatccagcgccgccagcaagatgcc
ttgcgcagtgccgaacaaagcatcgaagaaacccagcgccacgccagcgaagaccgcgac
aaacttagcgcgtgcgaacaagcccttgccgacctcgaaccccgcgaagaagccctcggc
gaacagcttgaaatggcagaagcccaccaacaagatgccgaagaccagctcaacgactgg
caagaacactggcacagcatccagcaacgcattgccgaacccacccggcacgcgcaagtc
gaaaaagcccgcatggaacagctcgaacgccaactgagccaaaccaaccagcgttttgag
cgcctgcaacaagaaaccggcagcctgtccaccacccgcttccttgacgacctgcaactg
ctcgaagcacaacagcaagaagccgccgaagcccacctgctcgccaccgaacagcttgcc
gacctcagcgccaccctcaacgaacaacagcaagcccaccgcgacgtgcaagcgcaactg
gatcaagcacgctcacaacgccaagccctacaagggcggctggcctcgctggaaaccttg
cagcaagccgggctggacaaaaccgacaaagcccgccagcaatggctcaccgccaaaggc
ttggacaaagccccgcgcatcgccgaacaattacgcgtcgcgagtggttgggaaacagca
gttgaaaccgtattgggcgaaggtttagatactatttgcctggattccctaccaattatt
aacgactttccagcctctggcatcagtttgctagaaaaccacgccagtaggccggacacc
agtccgacaatgctggccagcaaaatccaataccccacacatgccagcaccttatttgct
ggcatccgctgtgccgaaaccctgccagaagccctatcgcaacgccacagcctagccccc
aacgaatccatcatcacccgtgacggcctgtggctcggcatcaactggttacgcagccca
cgccaatccgatgcacacagcggcatcctgcaacgccagcaagaaatcgaatccttacgc
gaacaactggcaacgctagaaaccagccttgccgactggcaacaacgcgctgacagcttg
cgcgacagtatccgcagccacgaacagcaacgtgatcaggcacaagccgacaccaaccgc
ctgcaccgcaccgaatccgaacagcgcagccgcttgctggccttgcaacagcgcatcgaa
cagctccacagccgccgccagcaaatcgacgccgactgcgccgaactcgacgcgcaacgg
atgcagcaggaagaagatcacctgctagccaccgaacaacgcaatgccgcactagccttg
ctggaaaccgtgcaaaccgaacgtgatcgactcgccgccagccgcgaacacttgcaacac
gccgtcaatgatgcgcggcgcaccttgcgcgagctacaagacgaagcccaagacatccgc
ctgcatctggaaaccaaccgcacccaacgcgacaacagccaacgccagcttgaacgcttc
accagccgcctcgaattgctggaacagcaacgcgacaccctcctcgaacaaatgcactta
caggacgatcccgccgccgacctacaagccgaacgcgataccgcgctgacgcaacgcgcc
gaagtcgaacagcgcctgactcaagcccggcaagccttgcaagcactggaagccgacatc
cgccagcaagataccgcacgggtgcaagccgaacgccttgtcgaacaaacccgcaccgag
caagagaaccgcaaactcgaatggcaagccgtgcaagtacgcgaacaaaccatcgctgaa
caatttgccaaaaccgaattcgacgccgccaacctgcaagccaccctgccagcggatgcc
cgcccggaacatttcctgcaacaactggacagcatacaacgcagcatccagcgtttaggc
gcgatcaaccttgccgccatcgacgaattccgcgaacaaagcgaacgcaagcaatatctg
gatcagcaaaacgacgatctggtcgccgcgctggaaacgctggataatgccatccgcaag
attgaccgcgaaacccgcgcccgcttcaaggaaaccttcgacaaggtaaatagccgcctg
caagagatgttcccacgcctgtttggtggcggcgaatgctatctggaaatgaccggcgat
gatctgctgaccacgggtgttgccatcatggcgcgtccgcccggtaagcgactttcgacc
atttacctaatgtcgggtggcgaaaaagccttaacagcagtagccttggtgttcgctatt
ttcgagttaaaccccgcacccttttgtatgctggacgaagtggatgcgccactcgatgaa
gctaacgtcgggcgattctgtgaactggtgcgacatatgtccgaacaggtacaatttatt
ttcatcacccacaataaaaccaccatggaacttgccgaaaaccttatcggtgttaccatg
cgtgaagcgggtgtctcgcgcttggtagcagttgatatggccgaagcggtcaaactagca
aatggctga
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