Thiothrix lacustris: RCF98_14045
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Entry
RCF98_14045 CDS
T09396
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tlc03029
]
RCF98_14045 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tlc02000
]
RCF98_14045 (bamA)
Mitochondrial biogenesis [BR:
tlc03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
RCF98_14045 (bamA)
Transporters [BR:
tlc02000
]
Other transporters
Pores ion channels [TC:
1
]
RCF98_14045 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_1
POTRA_2
YqfD
POTRA_TamA_1
Motif
Other DBs
NCBI-ProteinID:
WML90084
LinkDB
All DBs
Position
2870911..2873202
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AA seq
763 aa
AA seq
DB search
MKKHTLVISAVSCLLAVSQAAWAAAFVVRDIEVNGLERVAAGTVLNYLPARVGEQFNDAK
SADAIRALFQTGLFDDVQLGRRGDVLVVTVVERPAIGELNIKGNNKIPSEKLMQVLKLRN
ISKGDTLDKAALATIQRELEEQYQGMGHYGVDITTTVTPLERNRVAVNININEGNAARIQ
KVNITGNQAFSDAILLKQLESGPRGAFSIPFLSDSDKYSKEKLMGDLDALNSFYHDRGYI
NFEITSADVSMSPDKKNIFLNVAVNEGSQYKIGNVSVSGNPGLSKEQLGQSIKLRKGEVF
SQKALEETRKNLSNKLGAQGYAFTKVAATPDFDEANKQVGILLSVDQGKRTYVRRIDIRG
NNRTKDEVYRRELRQVESSWFSKEQVERSKTRLERLPYVEEATIESEPVAGTEDQIDLIV
TVKERSSNQFRVGAGYSQSQGVLFNVNLNQDNFMGTGKQLDMNVDNSDVNKNYSVGYTNP
YYTPDGISRGFSGYYKEYDAEAEDIASYASNRYGGSVNYTVPFSEHDSVYASLGAEKREI
VLGTDPAERITSFVDKNGAEYTQLPVTVSYVHDTRNRTIFPTEGQRHRVSLQANVPGSDL
QYQKLSYDGSAYKPITDNVTFAVKGKVGTTNTSGGLDGAPFFDKYYAGGIGSVRGFEQNS
LGSQDENDDPIGGDLTVTGTAEVQFPMPLAEDVKGLKMSTFVDGGNVFNKNGDFKSDELR
YSAGVGAVWLSPLGPFEVSYAKPLNAKDGDKEQQVQFSIGASF
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacatacactcgtcatttcggctgtgagctgcttactggcagtttctcaggct
gcgtgggctgctgcatttgtagttcgcgacattgaagttaatggtctggaacgcgttgcc
gccggtactgtgctgaattacctgcctgctcgtgttggtgaacagtttaatgatgccaag
tcagctgatgcgattcgggcgttattccaaacaggtttgtttgatgatgtgcaactgggt
cgccggggcgatgtgctggtggtaacggtggtggaacgccctgccattggtgagttaaac
atcaagggcaacaataagattccatctgaaaaactgatgcaagttttgaaactgcgcaat
atcagcaaaggcgataccctcgacaaagccgcactggccacgattcagcgggagttggag
gagcagtatcaaggcatggggcactacggtgtcgacatcacaaccacggtcacaccactt
gaacgtaaccgggttgcggtcaatatcaatattaatgaaggcaatgctgctcgtatacag
aaggttaatatcaccggtaatcaggcattttcggatgcaatattattgaagcaattggaa
tcaggccctcgtggggcattttccatcccgttcctcagtgacagcgataaatattccaaa
gaaaagctgatgggggatctggacgcgttaaatagtttttaccatgaccgtggttatatc
aattttgaaattacctcggccgacgtgtcgatgtcccctgacaagaaaaatattttcctg
aatgttgccgtcaatgaaggctcacagtacaagatcgggaatgttagtgtgtcgggcaac
cctgggctttccaaggagcaattggggcaatctatcaagttgcgcaagggcgaagtattt
tctcagaaagcactggaagagacgcgcaaaaatctctccaataaactcggtgcacagggt
tatgcctttaccaaagtagcggcaaccccagattttgatgaagccaataagcaagttggc
attttattgtcggttgaccaaggtaagcgaacgtatgtgcgtcgcattgatattcgtggt
aacaaccgcactaaggatgaagtgtatcgccgtgaattgcgtcaagtagaaagctcatgg
ttctccaaagagcaggtcgagcgttcaaaaacccggcttgagcgtttgccttatgtcgaa
gaggctacgattgagtctgaaccagtggcaggtactgaggatcaaattgacttgattgta
acggtcaaagagcgttcttcgaatcaatttcgtgtgggtgcaggctattcacagtctcag
ggcgtgttgttcaatgttaacctaaaccaagataacttcatgggtacaggtaaacagctg
gacatgaatgttgataacagtgacgttaacaagaattatagcgtcggttataccaaccct
tattatacgcctgatggcattagccgtggctttagtggctattacaaagaatacgatgcg
gaagctgaagatattgctagctatgcatccaaccgttacggtggcagcgttaactacact
gtaccgttcagtgagcacgattctgtgtatgcgagtcttggtgctgaaaaacgtgaaatt
gtattaggcacggatcctgcggaacgtattaccagctttgttgataaaaatggtgcggag
tatactcagcttccagtgacagtcagctacgtacatgatacccgtaaccgtaccattttt
ccgacagaggggcagcgccaccgggtgtccctgcaagctaatgtgccgggcagcgatctg
caatatcagaagttgagttatgacggttctgcttataaaccgattacagataatgtgact
tttgccgtcaagggcaaggtgggaactactaatacctctggtggtttggatggcgcaccc
ttctttgataagtattatgcaggtggtatcggcagcgtcagaggctttgagcaaaatagc
ttgggttcacaagatgaaaatgatgatccgatcggcggtgatttgaccgtcacagggacg
gctgaagtgcaattccccatgccgttggcggaagatgtgaaaggcttgaaaatgagtacc
ttcgtcgatggcggtaatgttttcaataagaacggcgatttcaaaagtgatgagttacgt
tattcggcaggtgtaggcgcggtatggttatccccgcttggcccgtttgaggtgagttat
gcgaagccattgaatgctaaagatggtgataaagaacaacaagttcaatttagcatcgga
gcatctttctaa
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