Thiothrix lacustris: RCF98_15060
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Entry
RCF98_15060 CDS
T09396
Symbol
fnr
Name
(GenBank) fumarate/nitrate reduction transcriptional regulator Fnr
KO
K01420
CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tlc03000
]
RCF98_15060 (fnr)
Transcription factors [BR:
tlc03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
RCF98_15060 (fnr)
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GFIT
Motif
Pfam:
HTH_Crp_2
cNMP_binding
Crp
Motif
Other DBs
NCBI-ProteinID:
WML90276
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Position
complement(3080605..3081357)
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AA seq
250 aa
AA seq
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MKTVPLQSAKKSAVSCHNCSLSELCLPRGLNREELDLLESSINKTIKIKKKDYLFHRGDN
QKAIFAIKAGAIKTSLSTPDGEEQILGFYLPGDLLGFDAFARDRHTCDAQALDDTLVCEL
SMDNFQELCGKLPIMRGQMMRQIGTEIEREQMLLLTLGQMRTEERLATFLSSLSERNKDR
GFSQAEFNLPMARHDLANYLGMAVETLSRMFSRLQEEKIIAVQHRLVKIEDMGRLKQLAH
HTCRPASDVL
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagttccgttacaaagtgcaaaaaaatcagcagtttcctgccacaattgtagc
ttgagtgaactttgcctacctcgtggattaaaccgtgaagagttggatctgctggaaagc
tccatcaacaaaacaataaaaatcaagaagaaggattacctttttcatcgtggtgacaat
caaaaagccatttttgctatcaaagcaggtgctatcaaaacttccctttccaccccagat
ggtgaggagcaaattcttggtttctacctgcccggcgacctactgggatttgatgccttt
gcccgcgaccgccatacctgcgatgcgcaagcactcgacgatacgctagtatgtgaattg
agcatggataactttcaagagttatgcggcaagctccctattatgcgtgggcaaatgatg
cgccagatcggcacagaaattgaacgcgaacaaatgctactgctaacattagggcagatg
cgcaccgaagaacgtctcgccacattcttatccagcctgtcagaacgcaacaaagatcgc
ggcttctcgcaagcagaattcaacctgccgatggcacgccatgaccttgccaactacctc
ggcatggctgttgaaaccctcagccgcatgttctcccgcttgcaagaagaaaaaatcatc
gcggtacaacatcgcctcgtcaaaatcgaagacatgggtcgcctcaaacaactggcacat
cacacctgccgtccagcgagtgatgtgctttaa
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