KEGG   Thiothrix lacustris: RCF98_15450
Entry
RCF98_15450       CDS       T09396                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
tlc  Thiothrix lacustris
Pathway
tlc00010  Glycolysis / Gluconeogenesis
tlc00020  Citrate cycle (TCA cycle)
tlc00260  Glycine, serine and threonine metabolism
tlc00280  Valine, leucine and isoleucine degradation
tlc00310  Lysine degradation
tlc00380  Tryptophan metabolism
tlc00620  Pyruvate metabolism
tlc00630  Glyoxylate and dicarboxylate metabolism
tlc00640  Propanoate metabolism
tlc00670  One carbon pool by folate
tlc00785  Lipoic acid metabolism
tlc01100  Metabolic pathways
tlc01110  Biosynthesis of secondary metabolites
tlc01120  Microbial metabolism in diverse environments
tlc01200  Carbon metabolism
tlc01210  2-Oxocarboxylic acid metabolism
tlc01240  Biosynthesis of cofactors
Module
tlc_M00009  Citrate cycle (TCA cycle, Krebs cycle)
tlc_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
tlc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
tlc_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:tlc00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    RCF98_15450 (lpdA)
   00020 Citrate cycle (TCA cycle)
    RCF98_15450 (lpdA)
   00620 Pyruvate metabolism
    RCF98_15450 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    RCF98_15450 (lpdA)
   00640 Propanoate metabolism
    RCF98_15450 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RCF98_15450 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    RCF98_15450 (lpdA)
   00310 Lysine degradation
    RCF98_15450 (lpdA)
   00380 Tryptophan metabolism
    RCF98_15450 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RCF98_15450 (lpdA)
   00670 One carbon pool by folate
    RCF98_15450 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tlc04147]
    RCF98_15450 (lpdA)
Enzymes [BR:tlc01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     RCF98_15450 (lpdA)
Exosome [BR:tlc04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   RCF98_15450 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_binding_2 Pyr_redox_3 HI0933_like GIDA FAD_binding_3 NAD_binding_8 FAD_oxidored Amino_oxidase AlaDh_PNT_C 3HCDH_N Thi4 Lys_Orn_oxgnase 2-Hacid_dh_C Lycopene_cycl DAO
Other DBs
NCBI-ProteinID: WML90353
LinkDB
Position
3173115..3174551
AA seq 478 aa
MTDKYDVIIIGAGPGGYVAAIRCAQLGLKTACVEEWINKQQKPALGGTCLNVGCIPSKAL
LESSERFEEIAKHNADHGITVDGLQIDVAKMVARKDKIVNQLTGGIEQLFKANGITWLQG
RGKLLAGKQVEVTAHDGTVATHAADNVIIAVGSTPIELPIAKWLDTRIVDSAGALDWETV
PEKLGVIGAGVIGLEMGSVWRRLGSEVVVIEAMDDFLGAADRDVAKSAQMQFKKQGLDIR
LSSKVAKVEAGDNGITVTYNDPKGEQTLLVDRLIVAVGRKSNTAGVLADDCGVQLDERGR
VVIDGHLQTAVPGVYAIGDCVVGPMLAHKASEEGVLVAEQIVGQKPHINYDAIPWVIYTH
PEIAWVGKTEAELKTAGVEYNVGSFPFAANGRAKAMDQADGLVKVLADANTDRILGVHFV
GPLASELVGQAVIAIETECSAEDLARMTFAHPTVSEAIHEAMLAVDGRALHAVGKKRK
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgactgataaatatgatgtcatcatcatcggggcaggccccggtggttatgtggcagct
atacgttgcgcccagctcggcctgaaaaccgcgtgtgtggaagagtggatcaacaaacag
caaaagccagccttgggcggcacttgcctgaatgtcggttgtattccttccaaagccttg
ttggaaagctccgagcgttttgaggaaatcgccaaacacaatgctgatcatggcattacg
gttgacggtttgcagattgacgttgccaaaatggttgcccgcaaggacaaaatcgtcaac
caattgacggggggcattgagcaattgttcaaggccaacgggatcacttggttacaaggc
cgtggcaagttgctggcaggcaagcaagtagaagtcactgcgcatgatggcacggttgcg
actcacgctgctgacaacgtgattattgcggttggttctaccccgattgaactgccgatt
gccaaatggctggatactcgcattgtcgattctgcgggtgcgttggattgggaaaccgtt
cctgaaaaactcggcgtgatcggcgcaggtgttatcggtctggaaatgggcagcgtctgg
cgtcgcctcggctctgaagtagttgtcatcgaagcgatggatgatttcctcggcgcggct
gaccgtgatgtcgccaaatcagcgcaaatgcaattcaagaagcaggggctggacatccgt
ctcagctcgaaagttgctaaggttgaagcaggcgataacggcatcaccgtgacctacaac
gaccctaaaggcgagcaaactttgctggttgaccgtttgatcgttgccgtcgggcgcaag
tccaacacggcgggtgttctggctgatgattgtggcgtgcaactcgatgagcgtgggcgc
gtagtgattgacggccacctgcaaacagccgtaccgggcgtgtacgccatcggtgactgc
gtggttggcccgatgcttgcacacaaagcctcggaagagggtgtgctggttgccgaacag
atcgtaggccaaaagccacatatcaactatgacgctattccgtgggttatttatactcac
ccggaaattgcgtgggtaggcaaaaccgaagccgaactcaaaacggcgggtgttgaatac
aacgttggtagcttcccgtttgctgctaatggtcgcgctaaagcgatggatcaagctgat
ggtctggtgaaagtactggcagatgccaacactgaccggattctaggcgtgcattttgtt
gggccattggcctctgaactggtgggacaagccgtgattgcgatcgaaaccgaatgttcg
gcggaagatcttgcacgcatgacctttgcgcaccccactgtttcagaagcgattcacgaa
gccatgttggcagtagatgggcgggcacttcatgccgttggcaaaaagcgtaagtaa

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