Thiothrix lacustris: RCF98_15470
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Entry
RCF98_15470 CDS
T09396
Symbol
acnB
Name
(GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
KO
K01682
aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:
4.2.1.3
4.2.1.99
]
Organism
tlc
Thiothrix lacustris
Pathway
tlc00020
Citrate cycle (TCA cycle)
tlc00630
Glyoxylate and dicarboxylate metabolism
tlc00640
Propanoate metabolism
tlc00720
Other carbon fixation pathways
tlc01100
Metabolic pathways
tlc01110
Biosynthesis of secondary metabolites
tlc01120
Microbial metabolism in diverse environments
tlc01200
Carbon metabolism
tlc01210
2-Oxocarboxylic acid metabolism
tlc01230
Biosynthesis of amino acids
Module
tlc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
tlc_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
tlc_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RCF98_15470 (acnB)
00630 Glyoxylate and dicarboxylate metabolism
RCF98_15470 (acnB)
00640 Propanoate metabolism
RCF98_15470 (acnB)
09102 Energy metabolism
00720 Other carbon fixation pathways
RCF98_15470 (acnB)
Enzymes [BR:
tlc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
RCF98_15470 (acnB)
4.2.1.99 2-methylisocitrate dehydratase
RCF98_15470 (acnB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase_2_N
Aconitase_B_N
Aconitase
Ketoacyl-synt_C
Motif
Other DBs
NCBI-ProteinID:
WML90357
LinkDB
All DBs
Position
3178107..3180710
Genome browser
AA seq
867 aa
AA seq
DB search
MLQEYRQHVAERAAQGIPPKPLDAAQTAALVDLLKNPPKGEEAFLVDLLENRVPAGVDEA
AYVKAGFLAAVASGEVKCALISQVRAVEVLGMMLGGYNVQPLIAALDSEVTAAVAATALS
HTLLVFDAFHDVEEKAKAGNAAAKQVMASWAAGEWFTSKPEVAKKITVTVFKVTGETNTD
DLSPAPDAWSRPDIPLHANAMLKMARDGIEPEVPGSVGPLKQIEAMKAQGFPVAYVGDVV
GTGSSRKSATNSVLWFFGDDMPGIPNKRVGGYCFGSKIAPIFFNTMEDSGSLPIEMDVAQ
MNMGDVVDVYPYEGVAKRHGTDEVISTFGLKTQVLLDEARAGGRINLIIGRGLTARARES
LGLPPVDLFRTPEQPADTGKGYTLAQKMVGKACGMKGVRPGMYCEPKMTTVGSQDTTGPM
TRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVTTHHTLPDFIMTRGGVSLRPGDGIIH
SWLNRMLLPDTVGTGGDSHTRFPMGISFPAGSGLVAFAAATGVMPLDMPESVLVRFTGKM
QPGITLRDLVHAIPHKAIQMGLLTVEKKGKKNVFNGTVVEIEGLDHLTVEQAFELSDASA
ERSAAGCTVALSEASVAEYLRSNIVMLKWMLSEGYGDVRTIERRIGKMEEWLANPSLLRA
DADAEYAAVIEINMDEIKEPILCAPNDPDDARLLSEVAGRKIDEVFIGSCMTNIGHFRAA
GKLLDAANTQIPTRMWIAPPTKMDAAQLSDEGYYNIYGRAGARMEMPGCSLCMGNQARIA
EKSTAVSTSTRNFPNRLGTGADVFLASAELASVAAVMGKLPTVAEYMEYANKLDSMSADI
YRYLNFDKMESYQHAAAKVVPIPVVAG
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaagaatatcgccaacacgttgcggaacgcgccgctcaaggcattccacccaag
cctctggatgctgcacaaactgccgcactggtggatttgctgaagaacccaccaaagggt
gaagaagcgtttctggttgacctactggaaaaccgcgtacctgcgggtgtggatgaggca
gcttatgtgaaagcgggtttcctcgctgcggttgccagcggtgaagtgaaatgcgcactg
atcagtcaggttcgtgcggttgaagtgttgggtatgatgctgggtggctacaatgtgcag
ccattgattgcagcactcgatagtgaagtcaccgcagcggtagcagcaacagcgttgtca
cacaccttgctagtgtttgatgcgttccacgatgtggaagaaaaagccaaagcgggcaat
gctgctgccaagcaggttatggcatcgtgggcggcgggtgaatggttcacttccaagcct
gaagtggctaagaaaatcaccgttaccgttttcaaagtaaccggcgaaaccaacactgac
gatttgtcgcctgcaccggatgcatggtcacgccctgacatcccactccatgctaacgcg
atgctgaaaatggcgcgtgacggtatcgagccagaagtgcccggttccgttggccctctg
aagcagatcgaagcaatgaaggcgcaaggcttcccagtggcttacgtcggtgacgtggta
ggtacaggttcttcacgtaaatcagcaaccaactccgtgctgtggttctttggcgatgat
atgccggggattccgaacaagcgtgtgggcggttactgttttggtagcaaaattgcacca
atcttcttcaataccatggaagattccgggtcgctgccgatcgaaatggatgttgcccaa
atgaacatgggcgatgtggttgatgtgtatccgtatgaaggcgttgctaagcgtcacggt
acagatgaagtcatttccaccttcggcctgaaaacgcaggtgttattggacgaagcccgt
gcgggtggtcgtatcaacctgattatcggtcgtggcttgacggccagagcgcgtgaatca
ctgggtctgccgcctgttgatctgttccgtacccctgagcagcctgctgacaccggcaaa
ggctacacactggcacagaaaatggtcggtaaggcttgtggtatgaagggtgtacgcccc
ggcatgtactgcgaaccgaaaatgactaccgtgggttcacaggatactactggtcctatg
actcgtgatgagttgaaagatttagcttgcctaggtttttcggctgatctggtcatgcag
tctttctgtcatacagcggcttaccctaagccggttgacgtaacgacgcatcacacgttg
cctgatttcatcatgacccgtggcggtgtttcgttgcgccctggtgatggcattatccac
tcgtggttgaaccgcatgttgttgccagataccgttggtaccggtggtgactcgcatacc
cgtttcccgatggggatttccttcccggcaggttctggtttggtggcatttgcggcggcg
acgggcgttatgccgctggatatgccggaatccgtgctggtacgtttcacgggcaaaatg
cagccgggtattaccctgcgtgacctcgttcatgccattccacacaaagcgatccagatg
ggtctgctgaccgtggaaaagaaaggcaagaagaacgtgttcaatggcaccgttgttgaa
atcgaaggtctggatcacctgaccgtcgaacaagcctttgaattgtcggatgcgtctgcg
gaacgttctgcggcgggctgtacggttgcgctgtctgaagcctctgtggcggaatacctg
cgttccaatatcgtcatgctgaagtggatgctgtccgaaggttacggcgatgtacgtacc
atcgaacgccgcattggcaagatggaagaatggctggctaacccaagcctgctgcgtgcg
gatgcggatgcagaatacgcggctgtgatcgaaatcaatatggatgagatcaaagagcct
atcctgtgcgcaccgaatgacccagatgatgcacgtctgttgtctgaagtggctggtcgc
aagattgatgaagtcttcatcggttcttgcatgaccaacatcggtcacttccgtgctgcg
ggcaagttgctggatgctgccaatacgcaaatcccaactcgtatgtggattgcaccaccg
accaagatggatgcagcccagttgagtgacgaaggttactacaacatctacggtcgtgcc
ggtgcgcggatggaaatgccgggctgttcactgtgtatgggtaatcaggcgcgtatcgct
gagaaatccaccgccgtgtccacctctacgcgtaacttcccgaaccgtttgggtacaggc
gctgacgtgttcctggcttctgctgaactggcatccgtggctgcggtcatgggtaaactg
ccaacagttgccgagtacatggaatacgccaacaagctggatagcatgtcggctgacatc
taccgctacctgaacttcgacaagatggaaagctaccaacatgcggcggcgaaagttgtg
ccgattccggtagttgctgggtaa
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