Thiothrix lacustris: RCF98_15650
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Entry
RCF98_15650 CDS
T09396
Name
(GenBank) nucleoside-diphosphate sugar epimerase/dehydratase
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
tlc
Thiothrix lacustris
Pathway
tlc00541
O-Antigen nucleotide sugar biosynthesis
tlc00552
Teichoic acid biosynthesis
tlc01100
Metabolic pathways
tlc01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
RCF98_15650
00552 Teichoic acid biosynthesis
RCF98_15650
Enzymes [BR:
tlc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
RCF98_15650
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Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
CoA_binding_3
RmlD_sub_bind
3Beta_HSD
adh_short
KR
PglD_N
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
WML90392
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Position
complement(3219901..3221838)
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AA seq
645 aa
AA seq
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MKTNNSPYTYFFRLERWQKRLIMLATDMCLLPFAVWAAFALRLGTWTPELHDGIWLLLLA
PLLSIPLFIKLGLYRAIVRYIGGQAIQAVFTGAMLSTLLLSAIVLLLDGQGIPKSFFPIY
GFTAFILVGGSRYLASRYYRLLMDAHHHKICVAIYGAGESGRQLAGILNRGKEYIPVLYL
DDEITLQGTILNGMKVHSPLTLPLLIEKYDLQQVLLAMPSASLEHRRAIVDHLEKLPVHV
RSIPSLNDLVSGNSSIGNLREIGIEELLGRLPIAPETNLLHANIQHKSVMVTGAGGSIGS
ELCRQIIRLAPTKLVLFESSEFALYQIERELQEYMAHENLDFPLIPVLGSVQDRQRVEEI
LRSCRIQTLYHAAAYKHVPMVECNPIEGIRNNTFGTFHTAQAALNAGVERFVLISTDKAV
RPTNVMGASKRMCELVLQGFSQLSGKTTFCMVRFGNVLGSSGSVVPLFRRQIQEGGPITV
THPDIIRYFMTIPEAAQLVIQAGAMAEGGEVFLLDMGEPVKILDLAKRMIRLSGLQVRDA
ANPQGDIAIEFTGLRPGEKLYEELLIDSDAERTAHPRILKAQENFLLWNELETVLNELRQ
ACEQRNLPMIYRLLSENVQGYVNKMPLHIPPSATVIPLPVKKVGT
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaacaactcaccttacacctatttttttaggttagaacgctggcaaaagcgt
ctaatcatgctagctactgatatgtgtctgctaccttttgccgtttgggcagcattcgca
ttacgtttaggcacatggacacctgagctacatgatggcatctggttgttactgctcgcc
cccctcttaagcatccccctctttatcaaactgggtctttaccgtgccattgtccgctac
atcggcgggcaagccatacaggcggtatttaccggggcaatgctctcgaccttactccta
tccgctattgtactgttgctcgatgggcaaggcattcctaaatcattttttcccatctac
ggctttaccgcctttattttagtgggtggcagtcgttatctagccagccgctactaccgt
ttgttgatggatgcacaccaccataaaatctgcgtagccatctatggcgcaggcgaatct
ggcagacaactcgctggcatccttaaccgtgggaaagaatatatccccgtgttgtatttg
gatgatgagatcacccttcagggcactattctcaatggcatgaaagtccactcaccgcta
accctgcccttgttaatcgaaaaatatgacctgcaacaggtactgctggcaatgccctca
gccagtcttgaacaccgtcgtgctattgttgaccatttggaaaaattgccggtgcatgtc
cgtagcatccccagcctaaacgatctggtatcaggcaatagcagcatcggcaatcttcgt
gaaattggcattgaagaattactaggtcgcctccccattgcgccagaaaccaacctgcta
catgcgaatatccaacataaaagcgtgatggtaaccggggcgggcggctctatcggctcg
gaactatgccgtcaaatcatccgcttagcaccgaccaaactggtgttgtttgaatcatct
gaattcgcactctaccaaattgagcgtgaattacaggaatacatggcgcatgaaaaccta
gacttccccctcattccagtactcggctcggtgcaagaccgccaacgggtagaagaaatc
ctgcgtagctgccgcattcaaaccctttaccacgcggcggcttacaaacacgtgccgatg
gtagaatgcaacccaattgaaggcatccgtaacaacacctttggtactttccacaccgct
caagcagcactcaatgctggagtagaacgtttcgtgctgatttccaccgacaaagccgtg
cgccccaccaatgttatgggcgccagcaaacgcatgtgtgaattggtattgcaaggtttc
agccaactgtcaggcaagacaaccttctgcatggtgcgctttggcaatgtactcggctct
tccggctcagttgttcccctgttccgccgccaaattcaagaaggcgggccgattaccgtc
acgcatccagatattatccgttatttcatgacgatccctgaggccgctcaactcgtcata
caagccggtgccatggcagaaggtggtgaagtattcctgctagacatgggtgaaccggtc
aagattcttgatcttgccaaacgcatgatccgcctgtctggcttacaagtacgcgatgcc
gccaaccctcaaggcgatattgctatcgaattcactggcctacgccccggtgaaaaattg
tatgaagaactattaatcgatagtgatgcagaacgtaccgctcacccccgcatcttgaag
gctcaggaaaacttcctgctgtggaatgagttagaaacggtattaaatgaactgcggcaa
gcctgtgaacagcgcaatctgcccatgatctaccgcttgctcagtgaaaacgtgcaaggc
tatgtcaacaaaatgccactgcatataccgccttctgccacggtgatccccttgcctgtc
aaaaaagttggtacataa
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