Thiothrix lacustris: RCF98_16000
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Entry
RCF98_16000 CDS
T09396
Name
(GenBank) VWA domain-containing protein
KO
K07114
Ca-activated chloride channel homolog
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tlc02000
]
RCF98_16000
Transporters [BR:
tlc02000
]
Other transporters
Pores ion channels [TC:
1
]
RCF98_16000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_2
TPR_2
TPR_11
TPR_1
TPR_8
TPR_14
TPR_16
TPR_7
TPR_12
TPR_6
BatA
TFIIA
Motif
Other DBs
NCBI-ProteinID:
WML90458
LinkDB
All DBs
Position
3293644..3295482
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AA seq
612 aa
AA seq
DB search
MLNDLHFLHPEWLWLLVLIPTVWGMKLWRAHQNGGWEQVVDKHLMPFVLSGKAGSMGFLP
LLLLSAALLVAVLAMAGPAWEKREVPVFRNQQALVVAMDFSASMYAEDEKPNRITLARFK
LLDILNARKDAQNGLVVFAGDAFTVTPLTDDVDTIEEQVKNLSPEIMPAPGSLLSPAIQR
SVELLQQSGMKQGNVLLITDGASDPEAAVSAAEIALSQGYRVSVLSLGTAEGAPVARAQG
GFLLDSSGKTVVAKVNLDDLQRIAKAGDGAFARAALGDADLNTLTAQWQATAANQLSAVQ
GRQTDTWVNEGYWLVLLLLPLAVLAFRRGWLSVMLVCILLPQQQPAHAFSWDELWKTPDQ
RGEAAFESGEAARATELFQNPEWKGAAAYKSKDYTTAAEQYASQASVNGQYNYGNALAKE
GKFKEAIAAYQQVLAADPKHEDAAYNLKVLEDAMKNQDKQQGKNDSQQQKPEQDQQKDQQ
QNQSGQQQQPQSGEDQQKQQDQQGQQGQQGKDQQQQDAQAQQDAEKAKAAEEKAKQQEQQ
AKQGEQDKDKQESKDEGEQGEQEAKDDPQQREQKQAAEQWLRRIPDDPSGLWRRKFQYQY
QQRGGQARGEEW
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacgacctgcatttcctgcaccctgaatggctttggttgttggtgttgatcccc
accgtgtgggggatgaagttatggcgtgcccatcaaaacggcggatgggaacaggtggtg
gacaaacacctgatgccgtttgtgttgagtggcaaggcggggagcatggggttcctgcca
ctgttgctattatcggcggccttgttggtagcggtgctggcgatggcggggcctgcgtgg
gaaaagcgcgaagtgccggtgttccgtaaccagcaggcattggtggtggcgatggatttt
tccgcctccatgtacgcggaagatgaaaagcccaaccggattacgctggcacgtttcaaa
ttgctcgacatcctgaacgcgcgcaaggatgcccagaatggactggtagtgtttgcgggc
gatgcctttacggtgacgccgctgaccgatgatgtggataccattgaagagcaggtgaaa
aacctttcgccagaaatcatgcctgcacccggtagtttgttgtcgcccgcgatccaacgt
tcggtggaattgctccagcaatcggggatgaaacagggcaatgttttgctgattactgat
ggtgcttccgacccagaggcggcggtttcagcggctgaaatagcgctcagtcagggctat
cgtgtgtccgtgttgtcgctcggtacggctgagggtgcgccggtagcgcgtgcacagggc
ggtttcttgctcgacagttccggtaaaacggtggttgccaaggttaatttggatgatttg
caacgcattgccaaagccggtgatggtgcgtttgcccgtgctgccttgggcgatgctgac
ctgaatacactcactgcgcaatggcaagcaaccgctgccaatcagttgagcgctgtgcaa
gggcggcaaaccgatacgtgggtaaacgaaggctattggttggtgctcttactgttaccg
ctggcagtattggcgtttcggcgtggttggcttagcgtcatgctggtgtgtattttgctg
ccgcaacaacaacctgctcacgctttcagttgggatgagttatggaaaacccccgatcag
cggggagaagccgccttcgagagcggcgaagcagcacgcgctacggaactgttccagaat
cctgagtggaaaggtgcggccgcctataaaagcaaggattacaccactgccgctgagcag
tatgcgagtcaggccagcgttaacggccagtacaattacggcaatgctttggcgaaggaa
ggcaagttcaaggaagcgatagcggcttaccaacaggtgctggcagccgaccccaagcat
gaagatgcggcttataacctaaaagttcttgaagatgcgatgaaaaatcaggacaagcag
cagggcaaaaacgactcgcaacaacagaagccagaacaagaccagcaaaaagatcagcag
caaaaccagtcaggtcagcagcaacagccccaatctggcgaagaccagcaaaaacaacag
gatcagcaaggtcagcaagggcaacagggcaaagatcaacagcaacaggatgctcaggca
cagcaagatgccgagaaggccaaagccgctgaagagaaagccaaacagcaagaacagcag
gccaaacaaggcgagcaggacaaggataagcaagagtccaaagacgaaggcgagcagggt
gagcaagaggcgaaggatgacccgcaacagcgtgagcagaaacaggctgctgaacaatgg
ttgcggcgtattcctgatgacccatccggcttgtggcggcgtaaattccagtaccaatac
cagcaacggggtggtcaggcgcgaggtgaagaatggtaa
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