Thiothrix lacustris: RCF98_16040
Help
Entry
RCF98_16040 CDS
T09396
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
tlc
Thiothrix lacustris
Pathway
tlc00260
Glycine, serine and threonine metabolism
tlc00460
Cyanoamino acid metabolism
tlc00630
Glyoxylate and dicarboxylate metabolism
tlc00670
One carbon pool by folate
tlc00680
Methane metabolism
tlc01100
Metabolic pathways
tlc01110
Biosynthesis of secondary metabolites
tlc01120
Microbial metabolism in diverse environments
tlc01200
Carbon metabolism
tlc01230
Biosynthesis of amino acids
tlc01240
Biosynthesis of cofactors
tlc04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RCF98_16040 (glyA)
09102 Energy metabolism
00680 Methane metabolism
RCF98_16040 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RCF98_16040 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RCF98_16040 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RCF98_16040 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RCF98_16040 (glyA)
Enzymes [BR:
tlc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RCF98_16040 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
WML90466
LinkDB
All DBs
Position
3302785..3304062
Genome browser
AA seq
425 aa
AA seq
DB search
MFSSQMKIAGYDDELWDAMQSEVRRQEEHIELIASENYASPRVMEAQGSVLTNKYAEGYP
AKRYYGGCEYVDKAEQLAIDRVKQLFGADYANVQPHSGSQANAAVYMALLNPGDTVLGMS
LAHGGHLTHGAKVNFSGKIYNAVQYGITDDGYIDYAEVERLAVEHKPKMIVAGFSAYSRV
IDWSKFREIADKVGAYLMVDMAHVAGLVAAGVYPSPVQIADVTTSTTHKTLRGPRGGIIL
AKSNPDLEKKFNSLVFPGIQGGPLMHVIAAKAVAFKEALEPEFTVYQQQVAKNAKVMAET
LIARGYKIVSGGTDNHLMLVDLIAKGITGKAADAALGAANITVNKNSVPNDPQSPFVTSG
IRVGTPAITTRGFKEAESAQLANWMADVLDNVEDTATIERVKEQVLDICARFPVYKSTSF
GDHPA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgttttctagccagatgaaaatcgcaggttatgacgatgaattgtgggatgcgatgcag
tccgaagtgcgtcgtcaagaagagcacattgaactgatagcttctgaaaactacgctagc
ccgcgtgtgatggaagctcagggttctgtgttgaccaataaatacgcggaaggctacccg
gccaagcgttattatggtggttgcgaatacgtcgataaagccgagcagcttgccattgac
cgcgttaaacaattgtttggcgcggattatgccaacgtgcaaccgcattccggctcacag
gccaacgcagccgtttacatggcgctgttgaaccccggtgatactgtactgggcatgagc
ctggcacacggtggtcacttgacccacggtgccaaagtcaacttctccggcaaaatctac
aacgcagtgcaatacggcatcaccgatgatggctacattgactatgctgaagttgagcgc
ctggcggttgaacacaagcccaaaatgatcgtggcaggtttttcggcttactcccgcgtc
attgactggagcaagttccgcgaaatcgccgataaagttggtgcgtacctgatggtagac
atggcacacgttgccggtttggtggccgcaggcgtgtaccccagcccggtgcaaattgct
gacgtgaccacgtccacgacgcacaaaaccttgcgtggtccgcgtggtggtatcattttg
gcgaaatccaatcctgatttggaaaagaagttcaactcactggtatttcccggtattcaa
ggcggccccttgatgcacgtcattgctgccaaagcggtggctttcaaggaagccctcgaa
cctgaatttaccgtttaccagcagcaagtcgccaagaatgccaaagtcatggcagaaacc
ctgattgcacgcggttataaaatcgtctctggtggtacggataatcacctgatgctggtt
gacctgattgccaaaggcattaccggcaaggctgcggatgcggcgctgggtgctgcgaac
atcaccgttaacaagaactccgtgccgaatgacccgcaatcgcctttcgtcaccagcggt
atccgcgtgggtacgcctgcgattaccacccgtggtttcaaggaagcagaatccgcgcaa
ctggctaactggatggcagacgtgttggacaatgtggaagacactgccacgatcgaacgg
gtgaaagagcaagtgctggacatttgcgcgcgcttcccggtctacaagtctacctcgttt
ggcgatcacccggcgtaa
DBGET
integrated database retrieval system