KEGG   Thiothrix lacustris: RCF98_16585
Entry
RCF98_16585       CDS       T09396                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
tlc  Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:tlc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tlc02048]
    RCF98_16585
Enzymes [BR:tlc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     RCF98_16585
Prokaryotic defense system [BR:tlc02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   RCF98_16585
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD Helicase_C HSDR_N_2 HSDR_N nSTAND3
Other DBs
NCBI-ProteinID: WML90573
LinkDB
Position
complement(3415049..3417502)
AA seq 817 aa
MTPELDLNEANTRAEFIEEHLRESQWGERHTRHSRIDREHVISIGKLLGGGQRASTRPAD
FVLLYKTHKLAVIEAKRVRLHPTEGVQQAKDYAALLKIRFAYATNGKQIYRIDMLTAQET
YVDRYPTPEELWHATFAQPNDWRDRFSTIPFEDKSGSWQPRYYQHNAIEATLEALINGKD
RILLTLATGTGKTAIAFQIAWKLFHSRWNAKAWRGETSVDRQPRILFLADRNILANQAYN
AFSAFPEDAMVRIAPNVIRKKKAVPKNGNLFFTIFQTFMTDTKDADGNPTPSFGDYPPDF
FDLIIIDECHRGGANDEGSWRGIMEYFNTAVQIGLTATPKRDGNVDTYKYFGEAVYTYSL
KEGINDGFLTPFRIKRIVSTLDEYTHATDDEVLEGEVEAGRTYTEAEMNQLVEVEDRERH
RVKTFMNLIDQSEKTLVFCATQQHALAVRNLINQMKRSTQPNYCVRVAADDGKEGERLLS
AFQDNEKNIPTILTTSRKLSTGVDARNVRNIILMRPVNSMIEFKQIVGRGTRLFDFKDYF
TLYDFVKAYEHFKDPEWDGEPEVCKVCNQRVCICEAEPCSNCQQRPCVCPPKPCKQCEQS
PCVCEAQLCEVCGETPCNCLQPPKRAKIKLAAGKADNIQNLISTEFLGEDGKPMSVQDYL
QQFYATLPEFFKDEEELRTLWSQPETRQGLLDGLQAKGYATAQLEVISRAVNAEGSDLFD
VLAHIAFAFPTKTREERVAAHKSRIYQGYNYKQREFIEFILQHYVDSGVTELATPKLKTF
IDLKYQGIRDMPTELGKAADVKRLFVELQQRLYTPLN
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgactccagaactcgacctcaacgaagccaatacccgcgccgaattcatcgaggaacac
ctgcgggaatcgcaatggggcgaacgccacacacgccattcgcgcattgaccgcgaacac
gtcatttccatcggtaaattgctcggtggcggacaacgcgccagcacccgccctgcggat
ttcgtgctgctctacaaaactcacaaactagccgtcatcgaagccaaacgagtacgcctt
caccccaccgaaggcgtgcaacaagccaaagattacgccgcactgttgaaaattcgcttt
gcctacgccactaacggtaaacagatttaccgcatcgacatgctcaccgcgcaagaaacc
tacgtcgaccgctacccaaccccagaagagctatggcacgccacttttgcccagccgaac
gattggcgcgaccgtttcagcacgatcccgtttgaagacaaaagcggctcgtggcaaccg
cgttactaccaacacaacgctattgaagccaccctcgaagccctcatcaacggcaaagac
cgcattctgctaaccctagcaaccggcacaggcaaaaccgcgatagccttccagattgcg
tggaaattgttccacagccgttggaatgccaaagcatggcgcggtgagaccagcgttgac
cgccagccgcgcatcctgtttctggcggatcgcaatatcctcgccaatcaagcctacaac
gccttttccgccttccccgaagatgcaatggtgcggattgcgccgaatgtgatccgcaaa
aagaaagccgtacccaaaaacggcaacctgtttttcaccattttccaaaccttcatgacc
gacaccaaggacgcggacggcaaccccacgcccagctttggcgattatccccccgacttt
ttcgacctgatcatcatcgacgaatgccaccgtggcggcgcgaatgacgaaggcagttgg
cgcgggatcatggagtatttcaacacagcggtacaaatcggcttaaccgccacccccaaa
cgcgatggcaatgtcgacacctacaaatattttggtgaagcggtgtacacctactcgctc
aaggaaggcattaatgacggtttcctgaccccgtttcggatcaagcgcattgtcagcacc
ctcgacgaatacacccatgcaaccgacgacgaagtgctggaaggcgaagtcgaagcaggc
cgaacctacaccgaagccgaaatgaatcagttggtggaagtcgaagaccgcgaacgccac
cgggtcaaaaccttcatgaacctgatcgaccaaagcgaaaaaaccttggtgttttgcgcc
acccaacaacatgccttagcggtgcgcaacctcatcaaccagatgaagcgcagcacccaa
ccgaattactgcgtgcgcgtcgcggcggatgatggcaaggaaggcgaacgcctgctgagt
gcgtttcaggataatgaaaagaacatcccgacgattttgactacttcacgcaaactttcc
accggcgtggatgcgcggaatgtgcgcaatatcatcctgatgcgccccgtcaacagcatg
atcgaattcaaacaaattgtcgggcgtggcacgcgcctattcgatttcaaagactacttc
accctgtacgacttcgtaaaagcctacgaacactttaaagaccccgagtgggacggcgag
ccggaggtgtgtaaggtctgcaatcaacgggtgtgtatctgcgaggcagaaccttgctcc
aattgccaacaacgcccgtgtgtttgcccaccgaaaccgtgcaaacagtgcgagcaatcg
ccgtgtgtgtgcgaagcgcagctatgtgaagtgtgcggcgaaacaccgtgcaattgcctg
caaccacccaaacgcgccaaaataaaactagccgcaggcaaagccgacaacatccaaaac
ctgatttctactgaattcctcggtgaagatggcaagcccatgagtgtgcaagattatctg
caacaattttacgccaccttaccggaatttttcaaagatgaagaagaattgcgcaccttg
tggagccagcccgaaacccgccaaggcttgctggatggcttacaggcaaaaggttacgca
acggcacaattagaagtcatcagccgcgcggtgaatgccgagggcagtgatttgtttgac
gtattagcacacatcgcgtttgcattccccaccaaaacccgtgaggagcgcgttgccgcc
cacaaatcccggatttaccaaggctacaactacaaacagcgtgaattcatcgagttcatc
ttgcagcattatgtggatagcggtgtcacggaactagccacgcccaagctcaaaaccttc
atcgacctgaagtatcaaggtatccgtgacatgccaacagaattaggcaaagcggcggat
gtaaaaagactgtttgtggaactccagcaacgtttgtatacgccacttaactaa

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