Thiothrix lacustris: RCF98_16855
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Entry
RCF98_16855 CDS
T09396
Symbol
secF
Name
(GenBank) protein translocase subunit SecF
KO
K03074
preprotein translocase subunit SecF
Organism
tlc
Thiothrix lacustris
Pathway
tlc03060
Protein export
tlc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
RCF98_16855 (secF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RCF98_16855 (secF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tlc02044
]
RCF98_16855 (secF)
Secretion system [BR:
tlc02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
RCF98_16855 (secF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
Sec_GG
Holin_9
Motif
Other DBs
NCBI-ProteinID:
WML90626
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All DBs
Position
complement(3472740..3473690)
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AA seq
316 aa
AA seq
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MLEFFHFKKAIPFMRHGKTTTTISLATFVFSVFALLFYGLNLGVDFTGGTVMEVRYAQAA
PIDNIREAIKATGYHEVAVQNFGSTQDVLIRLPLKEGVSSAQVSEQIMGVLKTGTPDVSL
SKVDFVGGQVGQELYENGGLALILVAAGIIIYLAFRFEWRFAVSAAIANLHDVVIILGLF
AFFQWQFDLTVLAGILAILGYSVNESVVVFDRIRENIRTMRDDTIPDIIDSAITTTMSRT
IITHISTQIMVLAMLWFGGEALHNFALALTIGIMFGIYSSVLVASPLLLLFGLQREHMIP
KESEKIEGMNADGSVV
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgttagagtttttccattttaagaaagccattccgttcatgcggcatggcaaaaccacc
accaccatctcgctggcgaccttcgtattttcagtattcgcgctgttgttctacggcctg
aatctgggggtagatttcaccggcggtacagttatggaagtgcgttacgcacaagctgcc
cctatcgacaatatccgtgaagccatcaaggccaccggctatcacgaagtggctgtgcag
aactttggttctactcaggatgtgttgatccgcctgcccttgaaggaaggcgtttccagt
gcgcaagtcagtgaacaaatcatgggcgtgctgaaaacaggtacaccagatgtatcactc
agcaaagtggatttcgtcggcgggcaagtcggtcaggaactgtatgaaaacggcggactg
gcactgattctggtggcggccggtatcattatttacctcgctttccgctttgaatggcgc
tttgcggtctctgccgcgattgccaacctgcatgacgtggtgatcattctgggcttgttt
gccttcttccaatggcagtttgacctgacagtattggcgggtattctggcgatattgggc
tactcggtgaatgaatcagtggtggtatttgaccggattcgggaaaatatccgcaccatg
cgcgatgacaccatccccgacattatcgacagcgccatcaccaccaccatgtcacgtacc
atcattacccacatttccacccagatcatggtattggccatgttgtggttcggtggtgaa
gccctgcacaatttcgcactggcactgaccatcgggattatgtttggtatttactcctcg
gtactggtggcatcgcccttgctgctgctgttcggcctccagcgtgaacacatgatcccg
aaagagagcgaaaaaatcgaaggcatgaacgccgacggttctgtcgtgtaa
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