Thiothrix lacustris: RCF98_16920
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Entry
RCF98_16920 CDS
T09396
Name
(GenBank) ribulose-bisphosphate carboxylase
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
tlc
Thiothrix lacustris
Pathway
tlc00630
Glyoxylate and dicarboxylate metabolism
tlc00710
Carbon fixation by Calvin cycle
tlc01100
Metabolic pathways
tlc01110
Biosynthesis of secondary metabolites
tlc01120
Microbial metabolism in diverse environments
tlc01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RCF98_16920
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
RCF98_16920
Enzymes [BR:
tlc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
RCF98_16920
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GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
WML90639
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Position
complement(3486112..3487491)
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AA seq
459 aa
AA seq
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MDQSGRYTDLSLKEEDLIAGGKHILVAYKMMPQPGHGYLEAAAHFAAESSTGTNVEVSTT
DDFTKGVDALVYYIDEATEDMRIAYPLDLFDRNITDGRMMVVSLLTLIIGNNQGMGDIKH
AKIHDFYVPERAIQLFDGPSKDISDMWRILGRPVVNGGYIAGTIIKPKLGLRPEPFAAAA
YQFWLGGDFIKNDEPQGNQVFCPAKKVYPLVYDAMKRAQDETGQAKLFSANITADDHYEM
CARADFILEAFGPDADKVAFLVDGFVGGPGMITTARRQYPNQYLHYHRAGHGMITSPSAL
RGYTAFVLAKLSRLQGASGIHVGTMGYGKMEGENSDKNIAYMIERDECQGPVYFQKWYGM
KPTTPIISGGMNALRLPGFFENLGHGNVINTSGGGSYGHIDSPAAGAISLRQSYECWKAG
ADPIEFAKEHKEFARAFESFPGDADKIYPGWREKLGVHK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggaccaatctggacgctacacagatcttagtctgaaagaagaagacctaatcgcaggt
ggtaagcacattctggttgcttacaaaatgatgccacagccaggtcatggctacctggaa
gcagcagcgcatttcgcggccgaatcttccaccggtacaaacgttgaagtttccaccact
gacgacttcaccaagggtgttgacgcactagtgtactacatcgacgaagccactgaagat
atgcgtatcgcgtacccactggacttgttcgaccgtaacatcactgacggccgcatgatg
gtcgtatcactgttgacgctgattatcggcaacaaccaaggcatgggcgacatcaaacac
gccaaaatccatgacttctatgtgcctgagcgtgccatccagttgttcgatggaccatcc
aaagacatctctgacatgtggcgtattctgggtcgtccagtggttaacggtggttacatc
gcgggtacgatcatcaagcctaaactgggtctacgcccagagccattcgcagcggctgct
taccagttctggctgggtggtgacttcatcaagaacgatgaaccacaaggcaaccaagtt
ttctgccctgccaagaaagtttacccactcgtttatgatgcaatgaaacgtgcacaagac
gaaaccggtcaagcaaaactgttctctgccaatatcaccgctgacgaccattacgaaatg
tgcgcccgtgctgacttcatcctcgaagcgtttggcccggatgcggacaaagttgctttc
ctggttgacggtttcgttggcggccctggcatgatcacgacagcacgtcgccagtaccct
aaccaatacctgcactatcaccgcgcgggtcacggcatgatcacttccccctctgcactg
cgtggttacactgcgtttgtactggcgaaactgtcacgtctgcaaggtgcttccggtatc
cacgtaggcactatgggctacggtaaaatggaaggcgaaaacagcgataaaaacatcgcg
tacatgatcgaacgtgacgagtgccaagggccagtctacttccaaaaatggtatggcatg
aagccaaccacgcccatcatctcgggcggtatgaacgcgctacgtctgccaggcttcttc
gagaacctcggtcacggtaacgttatcaacacttccggtggtggctcttacggtcacatt
gacagcccagcggctggtgcaatttccttgcgtcaatcgtatgagtgctggaaagccggt
gctgacccaatcgaattcgcgaaagagcacaaagaatttgctcgcgcattcgagtcattc
cctggcgatgcagacaagatctacccaggctggcgcgaaaagctgggcgtacataaataa
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